Rachel Palinski Diagnostic Medicine/Pathobiology Kansas State University College of Veterinary Medicine Biography Publications Institution JoVE Articles Rachel Palinski Rachel Palinski is an Assistant Professor in the Diagnostic Medicine and Pathobiology/Veterinary Diagnostic Laboratory, Kansas State University College of Veterinary Medicine (KSUCVM) in Manhattan, Kansas. She received her undergraduate degree from the University of Georgia, Athens, Georgia and her Ph.D. from Kansas State University.Dr. Palinski is interested in detection and characterization of high consequence pathogens via Next-Generation sequencing which she developed through her training as a post-doctoral Biosecurity Research Institute Fellow. Working at Plum Island Animal Disease Center (PIADC, 2018-2019) provided additional expertise in these areas, particularly bioinformatics analysis techniques.Dr. Palinski has been a faculty member at the KSUCVM since 2019 leading both the colleges’ core deep sequencing laboratory and the Veterinary Diagnostic Laboratory’s Next-Generation sequencing section. Her research program encompasses test development, bioinformatic techniques to analyze viral populations and virus-host interactions and novel pathogen identification and characterization. Publications Beta Human Papillomavirus 8 E6 Allows Colocalization of Non-homologous End Joining and Homologous Recombination Repair Factors PLoS Pathogens. 02, 2022 | Pubmed ID: 35148356 Bovine Rhinitis B Virus is Highly Prevalent in Acute Bovine Respiratory Disease and Causes Upper Respiratory Tract Infection in Calves The Journal of General Virology. 02, 2022 | Pubmed ID: 35130139 Molecular Detection of SARS-CoV-2 Strains and Differentiation of Delta Variant Strains Transboundary and Emerging Diseases. Dec, 2021 | Pubmed ID: 34964565 Near-Complete Genome of SARS-CoV-2 Delta (AY.3) Variant Identified in a Dog in Kansas, USA Viruses. 10, 2021 | Pubmed ID: 34696534 Whole-genome Classification of Rotavirus C and Genetic Diversity of Porcine Strains in the USA The Journal of General Virology. 05, 2021 | Pubmed ID: 33950806 Near-Complete Genome Sequences of Vesicular Stomatitis Virus Isolates from the 2020 Outbreak in Kansas Microbiology Resource Announcements. Feb, 2021 | Pubmed ID: 33602738 Into the Deep (Sequence) of the Foot-and-Mouth Disease Virus Gene Pool: Bottlenecks and Adaptation During Infection in Naïve and Vaccinated Cattle Pathogens (Basel, Switzerland). Mar, 2020 | Pubmed ID: 32178297 Foot-and-Mouth Disease Virus Serotype O/CATHAY Genome Sequences from Five Outbreaks in Vietnam, 2017 to 2019 Microbiology Resource Announcements. Jan, 2020 | Pubmed ID: 32001559 Genome Sequences of Four Foot-and-Mouth Disease Virus SAT 1 Topotype X Isolates from Cameroon Microbiology Resource Announcements. Dec, 2019 | Pubmed ID: 31806747 Comparison of Pathogenicity and Transmissibility of Influenza B and D Viruses in Pigs Viruses. 09, 2019 | Pubmed ID: 31569752 First Report of Near-Complete Genome Sequences of Foot-and-Mouth Disease Virus Serotype O Strains from Kenya Microbiology Resource Announcements. Aug, 2019 | Pubmed ID: 31467103 Near-Full-Length Genome Sequence of a Foot-and-Mouth Disease Virus of Serotype Southern African Territories 2 Isolated from Nigeria in 2014 Microbiology Resource Announcements. Aug, 2019 | Pubmed ID: 31467102 Genome Sequences of 18 Foot-and-Mouth Disease Virus Outbreak Strains of Serotype O Sublineage Ind2001d from India, 2013 to 2014 Microbiology Resource Announcements. Aug, 2019 | Pubmed ID: 31416875 First Genome Sequence of Foot-and-Mouth Disease Virus Serotype O Sublineage Ind2001e from Southern Vietnam Microbiology Resource Announcements. Mar, 2019 | Pubmed ID: 30863819 First Detection and Genome Sequence of Senecavirus A in Vietnam Microbiology Resource Announcements. Jan, 2019 | Pubmed ID: 30687818 Aerosol and Contact Transmission Following Intranasal Infection of Mice with Japanese Encephalitis Virus Viruses. 01, 2019 | Pubmed ID: 30669601 Contact Challenge of Cattle with Foot-and-Mouth Disease Virus Validates the Role of the Nasopharyngeal Epithelium As the Site of Primary and Persistent Infection MSphere. 12, 2018 | Pubmed ID: 30541776 A Novel Porcine Circovirus Distantly Related to Known Circoviruses Is Associated with Porcine Dermatitis and Nephropathy Syndrome and Reproductive Failure Journal of Virology. Jan, 2017 | Pubmed ID: 27795441 Highly Diverse Posaviruses in Swine Faeces Are Aquatic in Origin The Journal of General Virology. 06, 2016 | Pubmed ID: 27002315 Using Next Generation Sequencing to Identify Mutations Associated with Repair of a CAS9-induced Double Strand Break Near the CD4 Promoter Changkun Hu*1, Tyler Doerksen*2, Taylor Bugbee1, Nicholas A. Wallace1, Rachel Palinski2,3 1Division of Biology, Kansas State University, 2Kansas State Veterinary Diagnostic Laboratory, Kansas State University, 3Department of Diagnostic Medicine/Pathobiology, Kansas State University JoVE 62583 Genetics
Using Next Generation Sequencing to Identify Mutations Associated with Repair of a CAS9-induced Double Strand Break Near the CD4 Promoter Changkun Hu*1, Tyler Doerksen*2, Taylor Bugbee1, Nicholas A. Wallace1, Rachel Palinski2,3 1Division of Biology, Kansas State University, 2Kansas State Veterinary Diagnostic Laboratory, Kansas State University, 3Department of Diagnostic Medicine/Pathobiology, Kansas State University JoVE 62583 Genetics
