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Journal / Genetics / マイクロバイオームデータにおける線形判別分析効果サイズ(LEfSe)によるバイオマーカーの補助選択…
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Genetics

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JoVE Journal Genetics
マイクロバイオームデータにおける線形判別分析効果サイズ(LEfSe)によるバイオマーカーの補助選択
Determining the Role of Maternally-Expressed Genes in Early Development with Maternal Crispants
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Determining the Role of Maternally-Expressed Genes in Early Development with Maternal Crispants
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マイクロバイオームデータにおける線形判別分析効果サイズ(LEfSe)によるバイオマーカーの補助選択

Article DOI: 10.3791/61715-v • 04:57 min • May 16th, 2022
May 16th, 2022 •
*1, *2, 3
1Marine Resources Research Centre, Tianjin Research Institute for Water Transport Engineering, M.O.T., 2Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering, North China Electric Power University, 3School of Environmental Science and Engineering, Huazhong University of Science and Technology
* These authors contributed equally

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LEfSe(LDA Effect Size)は、マイクロバイオームデータ内の2つ以上のグループを有意に特徴付けるゲノム特徴(遺伝子、経路、分類法など)を特定するための高次元バイオマーカーマイニング用のツールです。

Tags

遺伝学 183号 LEfSe バイオマーカー ゲノム 生物多様性 統計学的差異 生物学的相関
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