Enzyme Substrate Binding

Enzyme-substrate binding is the molecular recognition process through which an enzyme selectively associates with its substrate, enabling biochemical reactions to occur efficiently. The substrate enters the enzyme’s active site, where complementary shape, charge, and noncovalent interactions promote binding; induced-fit movements can then position reactive groups and stabilize the transition state. Binding strength and specificity influence reaction rates, inhibition, and metabolic regulation. Studying these interactions helps explain cellular pathways and supports applications in drug design, clinical diagnostics, biotechnology, and the engineering of enzymes with improved activity or selectivity.

Enzyme Substrate Binding - Related Videos

Research

JoVE Journal - Biochemistry
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High-throughput Screening of Carbohydrate-degrading Enzymes Using Novel Insoluble Chromogenic Substrate Assay Kits

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Cited by 5 •

2016

A high-throughput assay for enzyme screening is described. This multiplexed ready-to-use assay kit comprises of pre-chosen Chromogenic Polymer Hydrogel (CPH) substrates and complex Insoluble Chromogenic Biomass (ICB) substrates. Target enzymes are polysaccharide degrading endo-enzymes and proteases.

Research

JoVE EoE - Assay Techniques

Chromogenic Polymer Hydrogel-Based Enzyme Screening Assay: A High Throughput Method to Screen the Carbohydrate-Active Enzymes Using Synthetic Substrates

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2025

In this video, we demonstrate a high throughput assay for carbohydrate-active enzyme screening using insoluble chromogenic polymer hydrogel substrates. The enzyme degrades these substrates into a soluble colored product that can be quantified by measuring the color intensity of the product.

Education

JoVE Core - Chemistry

Enzymes

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2020

Inside living organisms, enzymes act as catalysts for many biochemical reactions involved in cellular metabolism. The role of enzymes is to reduce the activation energies of biochemical reactions by forming complexes with its substrates. The lowering of activation energies favor an increase in the rates of biochemical reactions. Enzyme deficiencies can often translate into life-threatening diseases. For example, a genetic abnormality resulting in the deficiency of the enzyme G6PD...

Enzyme Kinetics

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2019

Enzymes speed up reactions by lowering the activation energy of the reactants. The speed at which the enzyme turns reactants into products is called the rate of reaction. Several factors impact the rate of reaction, including the number of available reactants. Enzyme kinetics is the study of how an enzyme changes the rate of a reaction. Scientists typically study enzyme kinetics with a fixed amount of enzyme in the controlled environment of a test tube. When more reactant, or substrate, is...

Enzyme Activity - Concepts

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2019

Biological Catalysts All living organisms continuously perform numerous biochemical reactions to sustain their presence. Most of these reactions require an input of energy to start, which is called the activation energy. Catalysts are chemicals that lower the activation energy. Even though catalysts facilitate a chemical reaction, they are not consumed by it. This means a catalyst can facilitate a specific chemical reaction over and over in succession, increasing the rate of that reaction.

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