Scanning Electron Microscopy

Scanning electron microscopy is an imaging technique that produces detailed, three-dimensional views of a specimen’s surface by scanning it with a focused beam of electrons. As the beam interacts with the sample, emitted secondary and backscattered electrons are collected to generate images that reveal surface topography, texture, and composition at high resolution. In biology, specimens are typically fixed, dehydrated, mounted, and coated with a conductive material before examination under vacuum. This approach supports the study of cell morphology, tissue architecture, microorganisms, biomaterials, and host–microbe interactions, helping researchers connect structural features with biological function.

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Education

JoVE Science Education - Chemistry

Scanning Electron Microscopy (SEM)

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2023

Source: Laboratory of Dr. Andrew J. Steckl — University of Cincinnati A scanning electron microscope, or SEM, is a powerful microscope that uses electrons to form an image. It allows for imaging of conductive samples at magnifications that cannot be achieved using traditional microscopes. Modern light microscopes can achieve a magnification of ~1,000X, while typical SEM can reach magnifications of more than 30,000X. Because the SEM doesn’t use light to create images, the resulting pictures it...

Research

JoVE Journal - Neuroscience
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Focussed Ion Beam Milling and Scanning Electron Microscopy of Brain Tissue

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Cited by 105 •

2011

This protocol describes how resin embedded brain tissue can be prepared and imaged in the three dimensions in the focussed ion beam, scanning electron microscope.

Quantification of Membrane Ruffle Formation Using Scanning Electron Microscopy

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2025

This video demonstrates sample preparation, fixation, and imaging of a macrophage cell that displays membrane ruffles using scanning electron microscopy, SEM. Detailed information about membrane morphology and organization is crucial for understanding the physiological condition of the cells.

Scanning Electron Microscopy

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2023

A scanning electron microscope (SEM) is used to study the surface features of a sample by using an electron beam that scans the sample surface in a two-dimensional manner. Typically, areas between ~1 centimeter to 5 micrometers in width can be imaged. SEM can be used to image bacteria, viruses, tissues as well as larger samples like insects. Conventional SEM gives a magnification ranging from 20X to 30,000X and spatial resolution of 50 to 100 nanometers. Fundamental Principles Accelerated...

Analysis of Brain Mitochondria Using Serial Block-Face Scanning Electron Microscopy

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Cited by 32 •

2016

Mitochondrial visualization and analysis from mammalian brain tissue is a challenging task. Here, we describe how three dimensional (3D) reconstruction analysis from the serial block-face scanning electron microscopy (SBFSEM) can be used to gain insights on the morphological and volumetric analysis of this critical energy generating organelle.

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