Spine Subtype Classification

Spine subtype classification is the identification and grouping of neuronal dendritic spines according to features such as shape, size, and neck structure, providing a framework for studying synaptic organization in neuroscience. Researchers typically use fluorescence or electron microscopy with manual or computational image analysis to distinguish morphologies including mushroom, thin, stubby, and filopodial spines. Because spine structure reflects aspects of synaptic maturity, connectivity, and plasticity, classification helps relate neuronal architecture to learning, development, and circuit function. It also supports research into neurological and psychiatric disorders by revealing changes in spine density or morphology after disease, injury, genetic mutation, or pharmacological treatment.

Spine Subtype Classification - Related Videos

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JoVE EoE - Neuroimaging

Quantification of Dendritic Spines Using Confocal Microscopy Imaging

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2025

Source: Gouder, et. al. Three-dimensional Quantification of Dendritic Spines from Pyramidal Neurons Derived from Human Induced Pluripotent Stem Cells. J. Vis. Exp. (2015).This video demonstrates the imaging and analysis of dendritic spines in transduced, immunolabeled pyramidal neurons using confocal microscopy. Background noise is reduced, and dendrites are traced by estimating their diameter and length. Automated spine segmentation involves setting parameters for dendrite and spine dimensions...

Expression Analysis of Mammalian Linker-histone Subtypes

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Cited by 22 •

2012

We describe a set of assays to analyze expression levels of H1 linker histones. mRNA of individual H1 genes are quantitatively measured by random primer based reverse transcription followed by real-time PCR, whereas protein quantification of H1 histones is achieved by HPLC analysis.

Subtype-selective Electroporation of Cortical Interneurons

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Cited by 13 •

2014

This procedure shows how to target interneurons in the developing mouse forebrain by means of in utero electroporation. This technique was particularly efficient to achieve selective gene expression in interneuron subtypes destined to the superficial layers of the cortex.

Three-dimensional Quantification of Dendritic Spines from Pyramidal Neurons Derived from Human Induced Pluripotent Stem Cells

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Cited by 7 •

2015

Dendritic spines of pyramidal neurons are the sites of most excitatory synapses in mammalian brain cortex. This method describes a 3D quantitative analysis of spine morphologies in human cortical pyramidal glutamatergic neurons derived from induced pluripotent stem cells.

Harvesting DRG from Rat Spine: A Procedure to Extract Dorsal Root Ganglion from the Spine of a Rat Model

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2023

In this video, we demonstrate the extraction of dorsal root ganglion or DRG from a harvested rat spine for downstream applications.

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