Thomas Murphy

Graduate Program in Neuroscience, University of California Riverside

Affiliated withUniversity of California Riverside

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 8	2014

Other Publications

Article	Year
Minor donor consent to transplant surgery: a review of the law. Marquette law review\| PubMed ID: 11665111	1978
NADPH oxidase promotes NF-kappaB activation and proliferation in human airway smooth muscle. American journal of physiology. Lung cellular and molecular physiology\| PubMed ID: 11880305	2002
Relaxation of guinea pig trachealis during electrical field stimulation increases with age. Journal of applied physiology (Bethesda, Md. : 1985)\| PubMed ID: 11960931	2002
Growing up and advancing in airway smooth muscle research. Trends in pharmacological sciences\| PubMed ID: 12368062	2002
Mercury in bald eagle nestlings from South Carolina, USA. Journal of wildlife diseases\| PubMed ID: 12528436	2002
Selective binding of lectins to embryonic chicken vasculature. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society\| PubMed ID: 12704207	2003
Mast cells and resistance to peritoneal sepsis after burn injury. Shock (Augusta, Ga.)\| PubMed ID: 12785005	2003
Interaction between the innate and adaptive immune systems is required to survive sepsis and control inflammation after injury. Shock (Augusta, Ga.)\| PubMed ID: 12865655	2003
Injury primes the innate immune system for enhanced Toll-like receptor reactivity. Journal of immunology (Baltimore, Md. : 1950)\| PubMed ID: 12874240	2003
Use of intracellular cytokine staining and bacterial superantigen to document suppression of the adaptive immune system in injured patients. Annals of surgery\| PubMed ID: 14501506	2003
Injury, sepsis, and the regulation of Toll-like receptor responses. Journal of leukocyte biology\| PubMed ID: 14557385	2004
The effect of maternal smoking on respiratory and arousal patterns in preterm infants during sleep. American journal of respiratory and critical care medicine\| PubMed ID: 14684558	2004
Signal transducer and activator of transcription 3 (STAT3) activation in prostate cancer: Direct STAT3 inhibition induces apoptosis in prostate cancer lines. Molecular cancer therapeutics\| PubMed ID: 14749471	2004
Burn injury initiates a shift in superantigen-induced T cell responses and host survival. Journal of immunology (Baltimore, Md. : 1950)\| PubMed ID: 15067067	2004
Swimmer's CT: improved imaging of the lower neck and thoracic inlet. AJNR. American journal of neuroradiology\| PubMed ID: 15140736	2004
Polarization-insensitive cross correlation using two-photon absorption in a silicon photodiode. Optics letters\| PubMed ID: 15259734	2004
Amphotericin B enhances the synthesis and release of the immunosuppressive agent gliotoxin from the pulmonary pathogen Aspergillus fumigatus. Journal of medical microbiology\| PubMed ID: 15272057	2004
Occupational asthma: a case of Baker's asthma. Allergy and asthma proceedings : the official journal of regional and state allergy societies\| PubMed ID: 15317317	2004
Use of SYBR14, 7-amino-actinomycin D, and JC-1 in assessing sperm damage from rats with spinal cord injury. Cytometry. Part A : the journal of the International Society for Analytical Cytology\| PubMed ID: 15351989	2004
Ontogenesis of myosin light chain kinase mRNA and protein content in guinea pig tracheal smooth muscle. Pediatric pulmonology\| PubMed ID: 15376333	2004
Establishing a food-chain link between aquatic plant material and avian vacuolar myelinopathy in mallards (Anas platyrhynchos). Journal of wildlife diseases\| PubMed ID: 15465716	2004
Novel single-stranded oligonucleotides that inhibit signal transducer and activator of transcription 3 induce apoptosis in vitro and in vivo in prostate cancer cell lines. Molecular cancer therapeutics\| PubMed ID: 15486184	2004
Linking the "two-hit" response following injury to enhanced TLR4 reactivity. Journal of leukocyte biology\| PubMed ID: 15496450	2005
On the terminology for describing the length-force relationship and its changes in airway smooth muscle. Journal of applied physiology (Bethesda, Md. : 1985)\| PubMed ID: 15531570	2004
HAART drugs induce mitochondrial damage and intercellular gaps and gp120 causes apoptosis. Cardiovascular toxicology\| PubMed ID: 15531776	2004
Ontogenesis of myosin light chain phosphorylation in guinea pig tracheal smooth muscle. Pediatric pulmonology\| PubMed ID: 15573396	2005
Complications of major aortic and lower extremity vascular surgery. Seminars in cardiothoracic and vascular anesthesia\| PubMed ID: 15583793	2004
Stable expression of constitutively-activated STAT3 in benign prostatic epithelial cells changes their phenotype to that resembling malignant cells. Molecular cancer\| PubMed ID: 15647107	2005
The urinalysis--inexpensive and informative. Journal of insurance medicine (New York, N.Y.)\| PubMed ID: 15683210	2004
CD4+CD25+ regulatory T cells control innate immune reactivity after injury. Journal of immunology (Baltimore, Md. : 1950)\| PubMed ID: 15728508	2005
Avian vacuolar myelinopathy linked to exotic aquatic plants and a novel cyanobacterial species. Environmental toxicology\| PubMed ID: 15892059	2005
Length oscillation induces force potentiation in infant guinea pig airway smooth muscle. American journal of physiology. Lung cellular and molecular physiology\| PubMed ID: 15937066	2005
Maturation of guinea pig tracheal strip stiffness. American journal of physiology. Lung cellular and molecular physiology\| PubMed ID: 15951335	2005
Impaired sperm function after spinal cord injury in the rat is associated with altered cyclic adenosine monophosphate signaling. Journal of andrology\| PubMed ID: 16088035	2005
ATS Consensus Statement: Research opportunities and challenges in pediatric pulmonology. American journal of respiratory and critical care medicine\| PubMed ID: 16148195	2005
Thrombosis of sirolimus-eluting coronary stent in the postanesthesia care unit. Anesthesia and analgesia\| PubMed ID: 16192504	2005
The typical appearance of focal nodular hyperplasia in triple-phase CT scan, hepatobiliary scan, and Tc-99m sulfur colloid scan with SPECT. Clinical nuclear medicine\| PubMed ID: 16237299	2005
A maturational model for the study of airway smooth muscle adaptation to mechanical oscillation. Canadian journal of physiology and pharmacology\| PubMed ID: 16333352	2005
Mechanisms of airway smooth muscle relaxation during maturation. Canadian journal of physiology and pharmacology\| PubMed ID: 16333354	2005
Enhanced regulatory T cell activity is an element of the host response to injury. Journal of immunology (Baltimore, Md. : 1950)\| PubMed ID: 16365414	2006
Quality of life for children with functional abdominal pain: a comparison study of patients' and parents' perceptions. Pediatrics\| PubMed ID: 16396860	2006
VE-Cadherin-Cre-recombinase transgenic mouse: a tool for lineage analysis and gene deletion in endothelial cells. Developmental dynamics : an official publication of the American Association of Anatomists\| PubMed ID: 16450386	2006
Prevalence and identity of Cryptosporidium spp. in pig slurry. Applied and environmental microbiology\| PubMed ID: 16751569	2006
Tertiary hyperparathyroidism attributable to long-term oral phosphate therapy. Endocrine practice : official journal of the American College of Endocrinology and the American Association of Clinical Endocrinologists\| PubMed ID: 16772203	2006
Beneficial effects of vitamin E in sperm functions in the rat after spinal cord injury. Journal of andrology\| PubMed ID: 17079740	2007
Nox4 mediates TGF-beta1-induced retinoblastoma protein phosphorylation, proliferation, and hypertrophy in human airway smooth muscle cells. American journal of physiology. Lung cellular and molecular physiology\| PubMed ID: 17369289	2007
Long-term outcomes following neoadjuvant chemoradiotherapy for esophageal cancer. Annals of surgery\| PubMed ID: 17457163	2007
School nurse knowledge and perceptions of recurrent abdominal pain: opportunity for therapeutic alliance? Clinical pediatrics\| PubMed ID: 17475993	2007
Investigation of the link between avian vacuolar myelinopathy and a novel species of cyanobacteria through laboratory feeding trials. Journal of wildlife diseases\| PubMed ID: 17699072	2007
Porous silicon biosensor for detection of viruses. Biosensors & bioelectronics\| PubMed ID: 17723292	2007
Three paradigms of airway smooth muscle hyperresponsiveness in young guinea pigs. Canadian journal of physiology and pharmacology\| PubMed ID: 17823635	2007
Platelet-derived growth factor-induced stabilization of cyclooxygenase 2 mRNA in rat smooth muscle cells requires the c-Src family of protein-tyrosine kinases. The Journal of biological chemistry\| PubMed ID: 17855367	2007
Shape representation by a network of V4-like cells. Neural networks : the official journal of the International Neural Network Society\| PubMed ID: 17884335	2007
A role for IkappaB kinase 2 in bipolar spindle assembly. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 17939994	2007
Airway smooth muscle relaxation is impaired in mice lacking the p47phox subunit of NAD(P)H oxidase. American journal of physiology. Lung cellular and molecular physiology\| PubMed ID: 17993584	2008
Balancing perioperative risks in orthopedic surgery: the patient with a coronary stent. Orthopedics\| PubMed ID: 18019986	2007
Activation of protein kinase D1 in mast cells in response to innate, adaptive, and growth factor signals. Journal of immunology (Baltimore, Md. : 1950)\| PubMed ID: 18025234	2007
Reduced spontaneous relaxation in immature guinea pig airway smooth muscle is associated with increased prostanoid release. American journal of physiology. Lung cellular and molecular physiology\| PubMed ID: 18326825	2008
CT, MRI, PET, PET/CT, and ultrasound in the evaluation of obstetric and gynecologic patients. The Surgical clinics of North America\| PubMed ID: 18381118	2008
STAT3 inhibition in prostate and pancreatic cancer lines by STAT3 binding sequence oligonucleotides: differential activity between 5' and 3' ends. Molecular cancer therapeutics\| PubMed ID: 18566225	2008
Trends in the clinical characteristics of the U.S. cystic fibrosis patient population from 1995 to 2005. Pediatric pulmonology\| PubMed ID: 18613041	2008
Using synchronization for prediction of high-dimensional chaotic dynamics. Physical review letters\| PubMed ID: 18999603	2008
Treatment options for esophageal cancer. Expert opinion on pharmacotherapy\| PubMed ID: 19040340	2008
Nonlinearities in porous silicon optical waveguides at 1550 nm. Optics express\| PubMed ID: 19259177	2009
Nanoporous silicon multilayers for terahertz filtering. Optics letters\| PubMed ID: 19794768	2009
Complex dynamics and synchronization of delayed-feedback nonlinear oscillators. Philosophical transactions. Series A, Mathematical, physical, and engineering sciences\| PubMed ID: 20008405	2010
Eicosanoid-induced store-operated calcium entry in dendritic cells. The Journal of surgical research\| PubMed ID: 20080257	2011
Endoluminal management of anastomotic dehiscence after esophagectomy: an increasing quiver of options reflects the difficulty in realizing a definitive therapy. Gastrointestinal endoscopy\| PubMed ID: 20152315	2010
Adaptive synchronization of coupled chaotic oscillators. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 20365058	2009
Multimodality therapy for adenocarcinoma of the esophagus, gastric cardia, and upper gastric third. Recent results in cancer research. Fortschritte der Krebsforschung. Progrès dans les recherches sur le cancer\| PubMed ID: 20676879	2010
Model-based clustering of microarray expression data via latent Gaussian mixture models. Bioinformatics (Oxford, England)\| PubMed ID: 20802251	2010
Treatment response to pregabalin in fibromyalgia pain: effect of patient baseline characteristics. Expert opinion on pharmacotherapy\| PubMed ID: 20812879	2010
Variable Selection and Updating In Model-Based Discriminant Analysis for High Dimensional Data with Food Authenticity Applications. The annals of applied statistics\| PubMed ID: 20936055	2010
Age-stratified Bayesian analysis to estimate sensitivity and specificity of four diagnostic tests for detection of Cryptosporidium oocysts in neonatal calves. Journal of clinical microbiology\| PubMed ID: 21048012	2011
Fast physical random number generator using amplified spontaneous emission. Optics express\| PubMed ID: 21164703	2010
Applying random forests to identify biomarker panels in serum 2D-DIGE data for the detection and staging of prostate cancer. Journal of proteome research\| PubMed ID: 21166384	2011
Dynamic synchronization of a time-evolving optical network of chaotic oscillators. Chaos (Woodbury, N.Y.)\| PubMed ID: 21198112	2010
Novel glycan biomarkers for the detection of lung cancer. Journal of proteome research\| PubMed ID: 21214223	2011
Family-mediated exercise intervention (FAME): evaluation of a novel form of exercise delivery after stroke. Stroke; a journal of cerebral circulation\| PubMed ID: 21233462	2011
Babesias of red deer (Cervus elaphus) in Ireland. Veterinary research\| PubMed ID: 21314977	2011
Scalable parallel physical random number generator based on a superluminescent LED. Optics letters\| PubMed ID: 21403762	2011
Minimally invasive pyloroplasty. Seminars in thoracic and cardiovascular surgery\| PubMed ID: 21549274	2010
Modelling Cryptosporidium oocysts transport in small ungauged agricultural catchments. Water research\| PubMed ID: 21555142	2011
Robustness of optimal synchronization in real networks. Physical review letters\| PubMed ID: 21838362	2011
Successful endovascular treatment of a holo-hemispheric cerebral arteriovenous fistula in an infant. Journal of neurointerventional surgery\| PubMed ID: 21990541	2012
Progress assessed with the Mayo-Portland Adaptability Inventory in 604 participants in 4 types of post-inpatient rehabilitation brain injury programs. Archives of physical medicine and rehabilitation\| PubMed ID: 22200388	2012
Peri-parturient rise of Cryptosporidium oocysts in cows: new insights provided by duplex quantitative real-time PCR. Veterinary parasitology\| PubMed ID: 22681972	2012
Atrophic-appearing pancreas on magnetic resonance cholangiopancreatography as initial presentation of cystic fibrosis. Hawai'i journal of medicine & public health : a journal of Asia Pacific Medicine & Public Health\| PubMed ID: 22787562	2012
Calcium Signaling and Gliotransmission in Normal vs. Reactive Astrocytes. Frontiers in pharmacology\| PubMed ID: 22811669	2012
Laser-written nanoporous silicon ridge waveguide for highly sensitive optical sensors. Optics letters\| PubMed ID: 22854485	2012
Preoperative chemoradiotherapy for esophageal cancer. The New England journal of medicine\| PubMed ID: 22931331	2012
Airway contractility and remodeling: links to asthma symptoms. Pulmonary pharmacology & therapeutics\| PubMed ID: 22989721	2013
Simple method to characterize nonlinear refraction and loss in optical waveguides. Optics letters\| PubMed ID: 23164882	2012
Bidirectional scaling of astrocytic metabotropic glutamate receptor signaling following long-term changes in neuronal firing rates. PloS one\| PubMed ID: 23166735	2012
Evolutionary analysis of the MIXTA gene family highlights potential targets for the study of cellular differentiation. Molecular biology and evolution\| PubMed ID: 23188591	2013
Effects of thermal gradients on total internal reflection corner cubes. Applied optics\| PubMed ID: 23262618	2012
Polarization and far-field diffraction patterns of total internal reflection corner cubes. Applied optics\| PubMed ID: 23314626	2013
Passages: the journal, the editors and the specialty. Pediatric pulmonology\| PubMed ID: 23322533	2013
Significance of divergent expression of prostaglandin EP4 and EP3 receptors in human prostate cancer. Molecular cancer research : MCR\| PubMed ID: 23364535	2013
Panmictic structure of the Cryptosporidium parvum population in Irish calves: influence of prevalence and host movement. Applied and environmental microbiology\| PubMed ID: 23396342	2013
Experimental observations of group synchrony in a system of chaotic optoelectronic oscillators. Physical review letters\| PubMed ID: 23432248	2013
Multispectral image analysis for algal biomass quantification. Biotechnology progress\| PubMed ID: 23463683	2013
Absence of Cx43 selectively from osteocytes enhances responsiveness to mechanical force in mice. Journal of orthopaedic research : official publication of the Orthopaedic Research Society\| PubMed ID: 23483620	2013
Terahertz surface plasmon polaritons on a semiconductor surface structured with periodic V-grooves. Optics express\| PubMed ID: 23546087	2013
Multispectral image analysis for algal biomass quantification. Biotechnology progress\| PubMed ID: 23554374	2013
Chaotic dynamics of a frequency-modulated microwave oscillator with time-delayed feedback. Chaos (Woodbury, N.Y.)\| PubMed ID: 23556938	2013
Greedy feature selection for glycan chromatography data with the generalized Dirichlet distribution. BMC bioinformatics\| PubMed ID: 23651459	2013
Glycosylation status of serum in inflammatory arthritis in response to anti-TNF treatment. Rheumatology (Oxford, England)\| PubMed ID: 23681398	2013
Esophageal sphincter device for gastroesophageal reflux disease. The New England journal of medicine\| PubMed ID: 23697525	2013
A cross-sectional analysis of the prevalence of Barrett esophagus in otolaryngology patients with laryngeal symptoms. Journal of clinical gastroenterology\| PubMed ID: 23751847	2013
Death by late-presenting Bochdalek hernia in infant soon after congenital cardiac repair. World journal for pediatric & congenital heart surgery\| PubMed ID: 23799739	2013
Porous silicon integrated Mach-Zehnder interferometer waveguide for biological and chemical sensing. Optics express\| PubMed ID: 24105496	2013
Evaluation of prediction models for the staging of prostate cancer. BMC medical informatics and decision making\| PubMed ID: 24238348	2013
Astrocyte calcium microdomains are inhibited by Bafilomycin A1 and cannot be replicated by low-level Schaffer collateral stimulation in situ. Cell calcium\| PubMed ID: 24262208	2014
Rapid algal culture diagnostics for open ponds using multispectral image analysis. Biotechnology progress\| PubMed ID: 24265121	2014
Synchronization states and multistability in a ring of periodic oscillators: experimentally variable coupling delays. Chaos (Woodbury, N.Y.)\| PubMed ID: 24387556	2013
Progesterone receptor in the vascular endothelium triggers physiological uterine permeability preimplantation. Cell\| PubMed ID: 24485460	2014
Flux balancing of light and nutrients in a biofilm photobioreactor for maximizing photosynthetic productivity. Biotechnology progress\| PubMed ID: 24536006	2014