Thomas R. Neu

Department of River Ecology, Helmholtz Centre for Environmental Research - UFZ

Affiliated withHelmholtz Centre for Environmental Research - UFZ

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 5	2014

Other Publications

Article	Year
Investigation of lotic microbial aggregates by a combined technique of fluorescent in situ hybridization and lectin-binding-analysis. Journal of microbiological methods\| PubMed ID: 11777585	2002
Assessment of fluorochromes for two-photon laser scanning microscopy of biofilms. Applied and environmental microbiology\| PubMed ID: 11823234	2002
Photolysis and biodegradation of selected resin acids in River Saale water, Germany. Journal of environmental science and health. Part A, Toxic/hazardous substances & environmental engineering\| PubMed ID: 14672312	2003
Three-dimensional differentiation of photo-autotrophic biofilm constituents by multi-channel laser scanning microscopy (single-photon and two-photon excitation). Journal of microbiological methods\| PubMed ID: 14744445	2004
Community structure and photosynthetic activity of epilithon from a highly acidic (pH < or = 2) mountain stream in Patagonia, Argentina. Extremophiles : life under extreme conditions\| PubMed ID: 15635484	2004
Effects of selected pharmaceuticals on riverine biofilm communities. Canadian journal of microbiology\| PubMed ID: 16234864	2005
Three stages of a biofilm community developing at the liquid-liquid interface between polychlorinated biphenyls and water. Applied and environmental microbiology\| PubMed ID: 16269772	2005
Bacterial extracellular DNA forming a defined network-like structure. FEMS microbiology letters\| PubMed ID: 16907736	2006
Contribution of alginate and levan production to biofilm formation by Pseudomonas syringae. Microbiology (Reading, England)\| PubMed ID: 17005972	2006
Structure and shear strength of microbial biofilms as determined with confocal laser scanning microscopy and fluid dynamic gauging using a novel rotating disc biofilm reactor. Biotechnology and bioengineering\| PubMed ID: 17421046	2007
Structural and functional responses of river biofilm communities to the nonsteroidal anti-inflammatory diclofenac. Environmental toxicology and chemistry / SETAC\| PubMed ID: 17447540	2007
A flow-lane incubator for studying freshwater and marine phototrophic biofilms. Journal of microbiological methods\| PubMed ID: 17590463	2007
The EPS matrix: the "house of biofilm cells". Journal of bacteriology\| PubMed ID: 17675377	2007
Physiological adaptation of a nitrate-storing Beggiatoa sp. to diel cycling in a phototrophic hypersaline mat. Applied and environmental microbiology\| PubMed ID: 17766448	2007
In situ activity of suspended and immobilized microbial communities as measured by fluorescence lifetime imaging. Applied and environmental microbiology\| PubMed ID: 17981940	2008
Enrichment of anaerobic benzene-degrading microorganisms by in situ microcosms. FEMS microbiology ecology\| PubMed ID: 18081593	2008
Interaction between biofilm development, structure and detachment in rotating annular reactors. Bioprocess and biosystems engineering\| PubMed ID: 18320233	2008
Architecture of Deinococcus geothermalis biofilms on glass and steel: a lectin study. Environmental microbiology\| PubMed ID: 18373677	2008
Application of two component biodegradable carriers in a particle-fixed biofilm airlift suspension reactor: development and structure of biofilms. Bioprocess and biosystems engineering\| PubMed ID: 18379827	2009
In situ detection of bacteria in calcified biofilms using FISH and CARD-FISH. Journal of microbiological methods\| PubMed ID: 18571259	2008
In situ detection of freshwater fungi in an alpine stream by new taxon-specific fluorescence in situ hybridization probes. Applied and environmental microbiology\| PubMed ID: 18776035	2008
3D finite element model of biofilm detachment using real biofilm structures from CLSM data. Biotechnology and bioengineering\| PubMed ID: 19191328	2009
Imaging and quantifying virus fluorescence signals on aquatic aggregates: a new method and its implication for aquatic microbial ecology. FEMS microbiology ecology\| PubMed ID: 19416353	2009
Structure and composition of aggregates in two large European rivers, based on confocal laser scanning microscopy and image and statistical analyses. Applied and environmental microbiology\| PubMed ID: 19633114	2009
Fungal mycelia allow chemotactic dispersal of polycyclic aromatic hydrocarbon-degrading bacteria in water-unsaturated systems. Environmental microbiology\| PubMed ID: 19691501	2010
Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques. FEMS microbiology ecology\| PubMed ID: 19951369	2010
Aerated treatment pond technology with biofilm promoting mats for the bioremediation of benzene, MTBE and ammonium contaminated groundwater. Water research\| PubMed ID: 20074770	2010
Advanced imaging techniques for assessment of structure, composition and function in biofilm systems. FEMS microbiology ecology\| PubMed ID: 20180852	2010
Morphology of Filamentous Fungi: Linking Cellular Biology to Process Engineering Using Aspergillus niger. Advances in biochemical engineering/biotechnology\| PubMed ID: 20490972	2010
Online assessment of biofilm development, sloughing and forced detachment in tube reactor by means of magnetic resonance microscopy. Biotechnology and bioengineering\| PubMed ID: 20506514	2010
Vacuolated Beggiatoa-like filaments from different hypersaline environments form a novel genus. Environmental microbiology\| PubMed ID: 21651683	2011
Dissolution of calcite in the twilight zone: bacterial control of dissolution of sinking planktonic carbonates is unlikely. PloS one\| PubMed ID: 22102861	2011
Calcite biomineralization by bacterial isolates from the recently discovered pristine karstic herrenberg cave. Applied and environmental microbiology\| PubMed ID: 22179248	2012
Electron transfer and biofilm formation of Shewanella putrefaciens as function of anode potential. Bioelectrochemistry (Amsterdam, Netherlands)\| PubMed ID: 22658509	2013
Evidence for methane production by saprotrophic fungi. Nature communications\| PubMed ID: 22948828	2012
Impact of mycelia on the accessibility of fluorene to PAH-degrading bacteria. Environmental science & technology\| PubMed ID: 23452287	2013
Chip-calorimetric monitoring of biofilm eradication with antibiotics provides mechanistic information. International journal of medical microbiology : IJMM\| PubMed ID: 23453494	2013
Insights into the structure and metabolic function of microbes that shape pelagic iron-rich aggregates ("iron snow"). Applied and environmental microbiology\| PubMed ID: 23645202	2013
Benzene and sulfide removal from groundwater treated in a microbial fuel cell. Biotechnology and bioengineering\| PubMed ID: 23775304	2013
Extracellular DNA in adhesion and biofilm formation of four environmental isolates: a quantitative study. FEMS microbiology ecology\| PubMed ID: 23786537	2013
Mapping glycoconjugate-mediated interactions of marine Bacteroidetes with diatoms. Systematic and applied microbiology\| PubMed ID: 23809997	2013
Assessment of bacterial and structural dynamics in aerobic granular biofilms. Frontiers in microbiology\| PubMed ID: 23847600	2013
A chip-calorimetric approach to the analysis of Ag nanoparticle caused inhibition and inactivation of beads-grown bacterial biofilms. Journal of microbiological methods\| PubMed ID: 23968644	2013
Detection and quantification of a mycorrhization helper bacterium and a mycorrhizal fungus in plant-soil microcosms at different levels of complexity. BMC microbiology\| PubMed ID: 24025151	2013
Advanced techniques for in situ analysis of the biofilm matrix (structure, composition, dynamics) by means of laser scanning microscopy. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 24664825	2014
Investigation of microbial biofilm structure by laser scanning microscopy. Advances in biochemical engineering/biotechnology\| PubMed ID: 24840778	2014
Arsenic-rich Acid mine water with extreme arsenic concentration: mineralogy, geochemistry, microbiology, and environmental implications. Environmental science & technology\| PubMed ID: 25365451	2014
Quality of dissolved organic matter affects planktonic but not biofilm bacterial production in streams. The Science of the total environment\| PubMed ID: 25460970	2015