Yi-Wen Chen

Center for Neural Science, New York University

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 41	2015

Other Publications

Article	Year
Proteomics analysis of the DF-1 chicken fibroblasts infected with avian reovirus strain S1133. PloS one\| PubMed ID: 24667214	2014
Genetic medicine and the muscular dystrophies: triumphs and tribulations. Developmental medicine and child neurology\| PubMed ID: 11848111	2002
Sources of variability and effect of experimental approach on expression profiling data interpretation. BMC bioinformatics\| PubMed ID: 11936955	2002
Nuclear factor 90 mediates activation of the cellular antiviral expression cascade. AIDS research and human retroviruses\| PubMed ID: 12036489	2002
Response of rat muscle to acute resistance exercise defined by transcriptional and translational profiling. The Journal of physiology\| PubMed ID: 12433947	2002
Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs. BMC bioinformatics\| PubMed ID: 12456269	2002
Vibrio ruber sp. nov., a red, facultatively anaerobic, marine bacterium isolated from sea water. International journal of systematic and evolutionary microbiology\| PubMed ID: 12710616	2003
Molecular responses of human muscle to eccentric exercise. Journal of applied physiology (Bethesda, Md. : 1985)\| PubMed ID: 12937035	2003
Expression profiling of FSHD muscle supports a defect in specific stages of myogenic differentiation. Human molecular genetics\| PubMed ID: 14519683	2003
Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays. Bioinformatics (Oxford, England)\| PubMed ID: 15117752	2004
Beauvericin activates Ca2+-activated Cl- currents and induces cell deaths in Xenopus oocytes via influx of extracellular Ca2+. Chemical research in toxicology\| PubMed ID: 15892576	2005
Downregulation of myelination, energy, and translational genes in Menkes disease brain. Molecular genetics and metabolism\| PubMed ID: 15923132	2005
Activation of the endoplasmic reticulum stress response in autoimmune myositis: potential role in muscle fiber damage and dysfunction. Arthritis and rheumatism\| PubMed ID: 15934115	2005
Selective enhancement of tonic inhibition by increasing ambient GABA is insufficient to suppress excitotoxicity in hippocampal neurons. Biochemical and biophysical research communications\| PubMed ID: 16263086	2005
Dominant-negative effects of human P/Q-type Ca2+ channel mutations associated with episodic ataxia type 2. American journal of physiology. Cell physiology\| PubMed ID: 16306128	2006
Nuclear envelope dystrophies show a transcriptional fingerprint suggesting disruption of Rb-MyoD pathways in muscle regeneration. Brain : a journal of neurology\| PubMed ID: 16478798	2006
Endothelial cell activation and neovascularization are prominent in dermatomyositis. Journal of autoimmune diseases\| PubMed ID: 16504012	2006
Analysis of human skeletal muscle after 48 h immobilization reveals alterations in mRNA and protein for extracellular matrix components. Journal of applied physiology (Bethesda, Md. : 1985)\| PubMed ID: 16763108	2006
Elevated IgG titers to periodontal pathogens related to Buerger disease. International journal of cardiology\| PubMed ID: 17207873	2007
Alterations in mRNA expression and protein products following spinal cord injury in humans. The Journal of physiology\| PubMed ID: 17218363	2007
Gene expression responses over 24 h to lengthening and shortening contractions in human muscle: major changes in CSRP3, MUSTN1, SIX1, and FBXO32. Physiological genomics\| PubMed ID: 17519359	2007
Synergistic contribution of CD14 and HLA loci in the susceptibility to Buerger disease. Human genetics\| PubMed ID: 17653770	2007
Dominant-negative effects of episodic ataxia type 2 mutations involve disruption of membrane trafficking of human P/Q-type Ca2+ channels. Journal of cellular physiology\| PubMed ID: 17654512	2008
Gene selection for multiclass prediction by weighted Fisher criterion. EURASIP journal on bioinformatics & systems biology\| PubMed ID: 17713593	2007
Transcriptional pathways associated with skeletal muscle disuse atrophy in humans. Physiological genomics\| PubMed ID: 17804603	2007
DUX4, a candidate gene of facioscapulohumeral muscular dystrophy, encodes a transcriptional activator of PITX1. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 17984056	2007
Composite nano-titanium oxide-chitosan artificial skin exhibits strong wound-healing effect-an approach with anti-inflammatory and bactericidal kinetics. Macromolecular bioscience\| PubMed ID: 18072182	2008
Duration of chronic inflammation alters gene expression in muscle from untreated girls with juvenile dermatomyositis. BMC immunology\| PubMed ID: 18671865	2008
Chemical and clinical development of darinaparsin, a novel organic arsenic derivative. Anti-cancer agents in medicinal chemistry\| PubMed ID: 19075572	2008
A systematic approach to forming micro-contact imprints of creatine kinase. Organic & biomolecular chemistry\| PubMed ID: 19156314	2009
[Concept analysis of child abuse]. Hu li za zhi The journal of nursing\| PubMed ID: 19634101	2009
Association between periodontitis and anti-cardiolipin antibodies in Buerger disease. Journal of clinical periodontology\| PubMed ID: 19678860	2009
Gene expression and muscle fiber function in a porcine ICU model. Physiological genomics\| PubMed ID: 19706692	2009
Secretomic and proteomic analysis of potential breast cancer markers by two-dimensional differential gel electrophoresis. Journal of proteome research\| PubMed ID: 20052998	2010
Can overconfidence be debiased by low-probability/high-consequence events? Risk analysis : an official publication of the Society for Risk Analysis\| PubMed ID: 20199651	2010
Proteomics study of oxidative stress and Src kinase inhibition in H9C2 cardiomyocytes: a cell model of heart ischemia-reperfusion injury and treatment. Free radical biology & medicine\| PubMed ID: 20385227	2010
Trypsin-induced proteome alteration during cell subculture in mammalian cells. Journal of biomedical science\| PubMed ID: 20459778	2010
Multidisciplinary collaboration reporting child abuse: a grounded theory study. International journal of nursing studies\| PubMed ID: 20570266	2010
Forty-eight hours of unloading and 24 h of reloading lead to changes in global gene expression patterns related to ubiquitination and oxidative stress in humans. Journal of applied physiology (Bethesda, Md. : 1985)\| PubMed ID: 20798274	2010
Mitochondrial proteomics analysis of tumorigenic and metastatic breast cancer markers. Functional & integrative genomics\| PubMed ID: 21246238	2011
Plasma proteomic analysis of the critical limb ischemia markers in diabetic patients with hemodialysis. Molecular bioSystems\| PubMed ID: 21468429	2011
Junctional visual field loss in a case of Wyburn-Mason syndrome. Journal of neuro-ophthalmology : the official journal of the North American Neuro-Ophthalmology Society\| PubMed ID: 21613961	2012
Advanced development in analysis of phytochemicals from medicine and food dual purposes plants used in China. Journal of chromatography. A\| PubMed ID: 21733522	2011
The role of TRAIL in mediating autophagy in myositis skeletal muscle: a potential nonimmune mechanism of muscle damage. Arthritis and rheumatism\| PubMed ID: 21769834	2011
Proteomic analysis of gemcitabine-induced drug resistance in pancreatic cancer cells. Molecular bioSystems\| PubMed ID: 21894339	2011
Mechanisms underlying the sparing of masticatory versus limb muscle function in an experimental critical illness model. Physiological genomics\| PubMed ID: 22010006	2011
Proteomic identification of plasma biomarkers in uterine leiomyoma. Molecular bioSystems\| PubMed ID: 22193648	2012
Proteomic analysis of UVB-induced protein expression- and redox-dependent changes in skin fibroblasts using lysine- and cysteine-labeling two-dimensional difference gel electrophoresis. Journal of proteomics\| PubMed ID: 22270008	2012
Curcumin inhibits thrombin-stimulated connective tissue growth factor (CTGF/CCN2) production through c-Jun NH2-terminal kinase suppression in human gingival fibroblasts. Journal of periodontology\| PubMed ID: 22324466	2012
Proteome differences between male and female fetal cells in amniotic fluid. Omics : a journal of integrative biology\| PubMed ID: 22404150	2013
Proteomic and redox-proteomic analysis of berberine-induced cytotoxicity in breast cancer cells. Journal of proteomics\| PubMed ID: 22522123	2012
Hemopexin is up-regulated in plasma from type 1 diabetes mellitus patients: Role of glucose-induced ROS. Journal of proteomics\| PubMed ID: 22579751	2012
Exercise prescription for hospitalized people with chronic obstructive pulmonary disease and comorbidities: a synthesis of systematic reviews. International journal of chronic obstructive pulmonary disease\| PubMed ID: 22665994	2012
IL-6 signaling blockade increases inflammation but does not affect muscle function in the mdx mouse. BMC musculoskeletal disorders\| PubMed ID: 22716658	2012
Effect of high glucose on secreted proteome in cultured retinal pigmented epithelium cells: its possible relevance to clinical diabetic retinopathy. Journal of proteomics\| PubMed ID: 22813881	2012
Role of sepsis in the development of limb muscle weakness in a porcine intensive care unit model. Physiological genomics\| PubMed ID: 22851759	2012
Modular microfluidic system fabricated in thermoplastics for the strain-specific detection of bacterial pathogens. Lab on a chip\| PubMed ID: 22859220	2012
Microtubules underlie dysfunction in duchenne muscular dystrophy. Science signaling\| PubMed ID: 22871609	2012
Proteomic analysis of proteins responsible for the development of doxorubicin resistance in human uterine cancer cells. Journal of proteomics\| PubMed ID: 22889595	2012
High glucose-induced proteome alterations in retinal pigmented epithelium cells and its possible relevance to diabetic retinopathy. Molecular bioSystems\| PubMed ID: 23051786	2012
STAT1 activation by venous malformations mutant Tie2-R849W antagonizes VEGF-A-mediated angiogenic response partly via reduced bFGF production. Angiogenesis\| PubMed ID: 23086340	2013
Redox- and expression-proteomic analysis of plasma biomarkers in bladder transitional cell carcinoma. Molecular bioSystems\| PubMed ID: 23090237	2012
Conditional over-expression of PITX1 causes skeletal muscle dystrophy in mice. Biology open\| PubMed ID: 23125914	2012
Hyaluronic acid-dependent protection against alkali-burned human corneal cells. Electrophoresis\| PubMed ID: 23161167	2012
Immunoreactivity characterisation of the three structural regions of the human coronavirus OC43 nucleocapsid protein by Western blot: implications for the diagnosis of coronavirus infection. Journal of virological methods\| PubMed ID: 23174159	2013
DUX4 expression in FSHD muscle cells: how could such a rare protein cause a myopathy? Journal of cellular and molecular medicine\| PubMed ID: 23206257	2013
Identification of methicillin-resistant Staphylococcus aureus using an integrated and modular microfluidic system. The Analyst\| PubMed ID: 23308354	2013
Proteomics-based identification of plasma biomarkers in oral squamous cell carcinoma. Journal of pharmaceutical and biomedical analysis\| PubMed ID: 23312379	2013
Redox-proteomic analysis of doxorubicin-induced altered thiol activity in cardiomyocytes. Molecular bioSystems\| PubMed ID: 23340498	2013
Gene expression profiling of gastrocnemius of "minimuscle" mice. Physiological genomics\| PubMed ID: 23362141	2013
Redox-proteomic analysis of doxorubicin resistance-induced altered thiol activity in uterine carcinoma. Journal of pharmaceutical and biomedical analysis\| PubMed ID: 23425445	2013
Effects of corticosteroids in the development of limb muscle weakness in a porcine intensive care unit model. Physiological genomics\| PubMed ID: 23429211	2013
A sex- and region-specific role of Akt1 in the modulation of methamphetamine-induced hyperlocomotion and striatal neuronal activity: implications in schizophrenia and methamphetamine-induced... Schizophrenia bulletin\| PubMed ID: 23474853	2014
Synthesis, bifunctionalization, and remarkable adsorption performance of benzene-bridged periodic mesoporous organosilicas functionalized with high loadings of carboxylic acids. Chemistry (Weinheim an der Bergstrasse, Germany)\| PubMed ID: 23512281	2013
miR-411 is up-regulated in FSHD myoblasts and suppresses myogenic factors. Orphanet journal of rare diseases\| PubMed ID: 23561550	2013
Impaired autophagy, chaperone expression, and protein synthesis in response to critical illness interventions in porcine skeletal muscle. Physiological genomics\| PubMed ID: 23572537	2013
Cardioprotective Effects of Quercetin in Cardiomyocyte under Ischemia/Reperfusion Injury. Evidence-based complementary and alternative medicine : eCAM\| PubMed ID: 23573126	2013
DUX4 differentially regulates transcriptomes of human rhabdomyosarcoma and mouse C2C12 cells. PloS one\| PubMed ID: 23717650	2013
High-performance anion-exchange chromatography coupled with diode array detection for the determination of dencichine in Panax notoginseng and related species. Journal of separation science\| PubMed ID: 23720413	2013
Hyaluronic acid-dependent protection against UVB-damaged human corneal cells. Environmental and molecular mutagenesis\| PubMed ID: 23813585	2013
Survey of Asian patients with hepatitis B infection: limited knowledge of transmission and screening of family members. Journal of immigrant and minority health / Center for Minority Public Health\| PubMed ID: 23913129	2015
Identifying emerging trends for implementing learning technology in special education: a state-of-the-art review of selected articles published in 2008-2012. Research in developmental disabilities\| PubMed ID: 23962607	2013
Relationship between metabolic syndrome and diagnoses of periodontal diseases among participants in a large Taiwanese cohort. Journal of clinical periodontology\| PubMed ID: 24007401	2013
Acute iatrogenic Budd-Chiari syndrome following hepatectomy for hepatolithiasis: a report of two cases. World journal of gastroenterology : WJG\| PubMed ID: 24039374	2013
A human proteome microarray identifies that the heterogeneous nuclear ribonucleoprotein K (hnRNP K) recognizes the 5' terminal sequence of the hepatitis C virus RNA. Molecular & cellular proteomics : MCP\| PubMed ID: 24113282	2014
Morpholino treatment improves muscle function and pathology of Pitx1 transgenic mice. Molecular therapy : the journal of the American Society of Gene Therapy\| PubMed ID: 24232919	2014
Conditional expression of TGF-β1 in skeletal muscles causes endomysial fibrosis and myofibers atrophy. PloS one\| PubMed ID: 24244485	2013
Systematic review of non-invasive positive pressure ventilation for chronic respiratory failure. Respiratory medicine\| PubMed ID: 24315469	2014
Osseous wound repair under inhibition of the axis of advanced glycation end-products and the advanced glycation end-products receptor. Journal of the Formosan Medical Association = Taiwan yi zhi\| PubMed ID: 24389269	2015
Identification of bacterial factors involved in type 1 fimbria expression using an Escherichia coli K12 proteome chip. Molecular & cellular proteomics : MCP\| PubMed ID: 24692643	2014
Conditional independence mapping of DIGE data reveals PDIA3 protein species as key nodes associated with muscle aerobic capacity. Journal of proteomics\| PubMed ID: 24769234	2014
Sorafenib enhances effects of transarterial chemoembolization for hepatocellular carcinoma: a systematic review and meta-analysis. Journal of cancer research and clinical oncology\| PubMed ID: 24770582	2014
Common mechanisms of Alzheimer's disease and ischemic stroke: the role of protein kinase C in the progression of age-related neurodegeneration. Journal of Alzheimer's disease : JAD\| PubMed ID: 25114088	2015
Structural basis for the identification of an i-motif tetraplex core with a parallel-duplex junction as a structural motif in CCG triplet repeats. Angewandte Chemie (International ed. in English)\| PubMed ID: 25139267	2014
An analysis of anesthesia-controlled operating room time after propofol-based total intravenous anesthesia compared with desflurane anesthesia in ophthalmic surgery: a retrospective study. Anesthesia and analgesia\| PubMed ID: 25211391	2014
Proteomic analysis of rhein-induced cyt: ER stress mediates cell death in breast cancer cells. Molecular bioSystems\| PubMed ID: 25259860	2014
Asynchronous remodeling is a driver of failed regeneration in Duchenne muscular dystrophy. The Journal of cell biology\| PubMed ID: 25313409	2014
Antibody profiling of bipolar disorder using Escherichia coli proteome microarrays. Molecular & cellular proteomics : MCP\| PubMed ID: 25540388	2015
A novel BLAST-Based Relative Distance (BBRD) method can effectively group members of protein arginine methyltransferases and suggest their evolutionary relationship. Molecular phylogenetics and evolution\| PubMed ID: 25576770	2015
Investigation of gene effects and epistatic interactions between Akt1 and neuregulin 1 in the regulation of behavioral phenotypes and social functions in genetic mouse models of schizophreni... Frontiers in behavioral neuroscience\| PubMed ID: 25688191	2014
The effects of surface neuromuscular electrical stimulation on post-stroke dysphagia: A systemic review and meta-analysis. Clinical rehabilitation\| PubMed ID: 25697453	2015
Anxiety is correlated with running in adolescent female mice undergoing activity-based anorexia. Behavioral neuroscience\| PubMed ID: 25730124	2015
Clinical competency in child maltreatment for community nurses in Taiwan. International journal of nursing practice\| PubMed ID: 25759198	2015
Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae). International journal of molecular sciences\| PubMed ID: 25782156	2015
The synergistic effects of Chinese herb and injectable calcium silicate/β-tricalcium phosphate composite on an osteogenic accelerator in vitro. Journal of materials science. Materials in medicine\| PubMed ID: 25786397	2015
β2-Glycoprotein I-Dependent Anti-Cardiolipin Antibodies Associated With Periodontitis in Patients With Systemic Lupus Erythematosus. Journal of periodontology\| PubMed ID: 25817824	2015
High prevalence of lower extremity peripheral artery disease in type 2 diabetes patients with proliferative diabetic retinopathy. PloS one\| PubMed ID: 25822410	2015
Antibacterial and Odontogenesis Efficacy of Mineral Trioxide Aggregate Combined with CO2 Laser Treatment. Journal of endodontics\| PubMed ID: 25863406	2015
A de novo floral transcriptome reveals clues into Phalaenopsis orchid flower development. PloS one\| PubMed ID: 25970572	2015
Enlargement of Axo-Somatic Contacts Formed by GAD-Immunoreactive Axon Terminals onto Layer V Pyramidal Neurons in the Medial Prefrontal Cortex of Adolescent Female Mice Is Associated with Su... Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 25979087	2015
Culture Conditions Affect Expression of DUX4 in FSHD Myoblasts. Molecules (Basel, Switzerland)\| PubMed ID: 26007167	2015
Callosal damage and cognitive deficits in chronic carbon monoxide intoxication: A diffusion tensor imaging study. Journal of the neurological sciences\| PubMed ID: 26033717	2015
Tensile force on human macrophage cells promotes osteoclastogenesis through receptor activator of nuclear factor κB ligand induction. Journal of bone and mineral metabolism\| PubMed ID: 26204845	2015
Antibody Profiling of Bipolar Disorder Using Escherichia coli Proteome Microarrays. Molecular & cellular proteomics : MCP\| PubMed ID: 26232422	2015
Poly(dopamine) coating of 3D printed poly(lactic acid) scaffolds for bone tissue engineering. Materials science & engineering. C, Materials for biological applications\| PubMed ID: 26249577	2015
Elevated S100A9 expression in tumor stroma functions as an early recurrence marker for early-stage oral cancer patients through increased tumor cell invasion, angiogenesis, macrophage recrui... Oncotarget\| PubMed ID: 26315114	2015
The effects of injectable calcium silicate-based composites with the Chinese herb on an osteogenic accelerator in vitro. Biomedical materials (Bristol, England)\| PubMed ID: 26358585	2015
Transcriptional Pathways Associated with Skeletal Muscle Changes after Spinal Cord Injury and Treadmill Locomotor Training. BioMed research international\| PubMed ID: 26380273	2015
Tyrosine 705 Phosphorylation of STAT3 Is Associated with Phenotype Severity in TGFβ1 Transgenic Mice. BioMed research international\| PubMed ID: 26380299	2015
The effect of Tai Chi on four chronic conditions-cancer, osteoarthritis, heart failure and chronic obstructive pulmonary disease: a systematic review and meta-analyses. British journal of sports medicine\| PubMed ID: 26383108	2015