Patrick Giavalisco

Max Planck Institute of Molecular Plant Physiology, Golm, Germany

Affiliated withMax Planck Institute of Molecular Plant Physiology, Golm, Germany Max Planck Institute of Molecular Plant Physiology Max Planck Institute of Biology of Ageing

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JoVE Journal Publications

ArticleTotal : 2	Year
Publication title Cited by 67	2017
Publication title Cited by 7	2019

Other Publications

Article	Year
Protein identification by MALDI-TOF-MS peptide mapping: a new strategy. Analytical chemistry\| PubMed ID: 11985306	2002
Extraction of proteins from plant tissues for two-dimensional electrophoresis analysis. Electrophoresis\| PubMed ID: 12652593	2003
Large-scale plant proteomics. Plant molecular biology\| PubMed ID: 11860206	2002
Intra- and interspecific variation in primate gene expression patterns. Science (New York, N.Y.)\| PubMed ID: 11951044	2002
Proteomics of curcurbit phloem exudate reveals a network of defence proteins. Phytochemistry\| PubMed ID: 15276438	2004
Proteome analysis of Arabidopsis thaliana by two-dimensional gel electrophoresis and matrix-assisted laser desorption/ionisation-time of flight mass spectrometry. Proteomics\| PubMed ID: 15815986	2005
High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Plant molecular biology\| PubMed ID: 15821981	2005
Analysis of xylem sap proteins from Brassica napus. BMC plant biology\| PubMed ID: 15969751	2005
Evaluation of two-dimensional electrophoresis and liquid chromatography--tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. Electrophoresis\| PubMed ID: 15971193	2005
Transformation and other factors of the peptide mass spectrometry pairwise peak-list comparison process. BMC bioinformatics\| PubMed ID: 16318636	2005
Towards the proteome of Brassica napus phloem sap. Proteomics\| PubMed ID: 16400686	2006
High MS-compatibility of silver nitrate-stained protein spots from 2-DE gels using ZipPlates and AnchorChips for successful protein identification. Electrophoresis\| PubMed ID: 17447244	2007
Pseudomonas syringae type III effector AvrPtoB is phosphorylated in plant cells on serine 258, promoting its virulence activity. The Journal of biological chemistry\| PubMed ID: 17711844	2007
High-resolution direct infusion-based mass spectrometry in combination with whole 13C metabolome isotope labeling allows unambiguous assignment of chemical sum formulas. Analytical chemistry\| PubMed ID: 19072260	2008
PROTEOMER: A workflow-optimized laboratory information management system for 2-D electrophoresis-centered proteomics. Proteomics\| PubMed ID: 19259999	2009
RNA interference of LIN5 in tomato confirms its role in controlling Brix content, uncovers the influence of sugars on the levels of fruit hormones, and demonstrates the importance of sucrose... Plant physiology\| PubMed ID: 19439574	2009
13C isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic research. Analytical chemistry\| PubMed ID: 19588932	2009
Intersection of the tocopherol and plastoquinol metabolic pathways at the plastoglobule. The Biochemical journal\| PubMed ID: 19843012	2009
SlCCD7 controls strigolactone biosynthesis, shoot branching and mycorrhiza-induced apocarotenoid formation in tomato. The Plant journal : for cell and molecular biology\| PubMed ID: 19845881	2010
Discrimination of wine attributes by metabolome analysis. Analytical chemistry\| PubMed ID: 20387792	2010
Metabolomics unravel contrasting effects of biodiversity on the performance of individual plant species. PloS one\| PubMed ID: 20830202	2010
Demethylation of oligogalacturonides by FaPE1 in the fruits of the wild strawberry Fragaria vesca triggers metabolic and transcriptional changes associated with defence and development of th... Journal of experimental botany\| PubMed ID: 21273336	2011
Analysis of short-term changes in the Arabidopsis thaliana glycerolipidome in response to temperature and light. The Plant journal : for cell and molecular biology\| PubMed ID: 21309866	2011
Sample amount alternatives for data adjustment in comparative cyanobacterial metabolomics. Analytical and bioanalytical chemistry\| PubMed ID: 21340691	2011
A topological map of the compartmentalized Arabidopsis thaliana leaf metabolome. PloS one\| PubMed ID: 21423574	2011
Gibberellin biosynthesis and signalling during development of the strawberry receptacle. The New phytologist\| PubMed ID: 21443649	2011
Rapid metabolic evolution in human prefrontal cortex. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 21444806	2011
Elemental formula annotation of polar and lipophilic metabolites using (13) C, (15) N and (34) S isotope labelling, in combination with high-resolution mass spectrometry. The Plant journal : for cell and molecular biology\| PubMed ID: 21699588	2011
Corn hybrids display lower metabolite variability and complex metabolite inheritance patterns. The Plant journal : for cell and molecular biology\| PubMed ID: 21707803	2011
Toward the storage metabolome: profiling the barley vacuole. Plant physiology\| PubMed ID: 21949213	2011
High-resolution plant metabolomics: from mass spectral features to metabolites and from whole-cell analysis to subcellular metabolite distributions. The Plant journal : for cell and molecular biology\| PubMed ID: 22449042	2012
Ultra performance liquid chromatography and high resolution mass spectrometry for the analysis of plant lipids. Frontiers in plant science\| PubMed ID: 22629264	2011
Analysis of the compartmentalized metabolome - a validation of the non-aqueous fractionation technique. Frontiers in plant science\| PubMed ID: 22645541	2011
Proteaceae from severely phosphorus-impoverished soils extensively replace phospholipids with galactolipids and sulfolipids during leaf development to achieve a high photosynthetic phosphoru... The New phytologist\| PubMed ID: 22937909	2012
Differential remodeling of the lipidome during cold acclimation in natural accessions of Arabidopsis thaliana. The Plant journal : for cell and molecular biology\| PubMed ID: 23061922	2012
Systemic analysis of inducible target of rapamycin mutants reveal a general metabolic switch controlling growth in Arabidopsis thaliana. The Plant journal : for cell and molecular biology\| PubMed ID: 23173928	2013
Analysis of the interface between primary and secondary metabolism in catharanthus roseus cell cultures using (13)C-stable isotope feeding and coupled mass spectrometry. Molecular plant\| PubMed ID: 23253601	2013
Long-distance signaling in bypass1 mutants: bioassay development reveals the bps signal to be a metabolite. Molecular plant\| PubMed ID: 23335754	2013
Two Pdk1 phosphorylation sites on the plant cell death suppressor Adi3 contribute to substrate phosphorylation. Biochimica et biophysica acta\| PubMed ID: 23507047	2013
Comprehensive dissection of spatiotemporal metabolic shifts in primary, secondary, and lipid metabolism during developmental senescence in Arabidopsis. Plant physiology\| PubMed ID: 23696093	2013
Differential regulation of carbon partitioning by the central growth regulator target of rapamycin (TOR). Molecular plant\| PubMed ID: 23761348	2013
Metabolic analysis of adaptation to short-term changes in culture conditions of the marine diatom Thalassiosira pseudonana. PloS one\| PubMed ID: 23799147	2013
Analysis of subcellular metabolite distributions within Arabidopsis thaliana leaf tissue: a primer for subcellular metabolomics. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 24057387	2014
Arabidopsis poly(A) polymerase PAPS1 limits founder-cell recruitment to organ primordia and suppresses the salicylic acid-independent immune response downstream of EDS1/PAD4. The Plant journal : for cell and molecular biology\| PubMed ID: 24372773	2014
The sucrose-trehalose 6-phosphate (Tre6P) nexus: specificity and mechanisms of sucrose signalling by Tre6P. Journal of experimental botany\| PubMed ID: 24420566	2014
Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans. Nature communications\| PubMed ID: 24690587	2014
Diacylglycerol activates the light-dependent channel TRP in the photosensitive microvilli of Drosophila melanogaster photoreceptors. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 24806693	2014
Exceptional evolutionary divergence of human muscle and brain metabolomes parallels human cognitive and physical uniqueness. PLoS biology\| PubMed ID: 24866127	2014
Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant, cell & environment\| PubMed ID: 24895754	2014
Uric acid accumulation in an Arabidopsis urate oxidase mutant impairs seedling establishment by blocking peroxisome maintenance. The Plant cell\| PubMed ID: 25052714	2014
MALDI imaging mass spectrometry: discrimination of pathophysiological regions in traumatized skeletal muscle by characteristic peptide signatures. Proteomics\| PubMed ID: 25056804	2014
Sulphate fertilization ameliorates long-term aluminum toxicity symptoms in perennial ryegrass (Lolium perenne). Plant physiology and biochemistry : PPB\| PubMed ID: 25123423	2014
Lipid biosynthesis and protein concentration respond uniquely to phosphate supply during leaf development in highly phosphorus-efficient Hakea prostrata. Plant physiology\| PubMed ID: 25315604	2014
Consequences of induced brassinosteroid deficiency in Arabidopsis leaves. BMC plant biology\| PubMed ID: 25403461	2014
Systems-wide analysis of acclimation responses to long-term heat stress and recovery in the photosynthetic model organism Chlamydomonas reinhardtii. The Plant cell\| PubMed ID: 25415976	2014
Liquid chromatography high-resolution mass spectrometry for fatty acid profiling. The Plant journal : for cell and molecular biology\| PubMed ID: 25440443	2015
Integration of transcriptomics and metabolomics data specifies the metabolic response of Chlamydomonas to rapamycin treatment. The Plant journal : for cell and molecular biology\| PubMed ID: 25600836	2015
FAX1, a novel membrane protein mediating plastid fatty acid export. PLoS biology\| PubMed ID: 25646734	2015
Global analysis of the role of autophagy in cellular metabolism and energy homeostasis in Arabidopsis seedlings under carbon starvation. The Plant cell\| PubMed ID: 25649436	2015
Organization and evolution of brain lipidome revealed by large-scale analysis of human, chimpanzee, macaque, and mouse tissues. Neuron\| PubMed ID: 25661180	2015
Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato. The Plant cell\| PubMed ID: 25770107	2015
Central role of FaGAMYB in the transition of the strawberry receptacle from development to ripening. The New phytologist\| PubMed ID: 26010039	2015
A Transcriptional and Metabolic Framework for Secondary Wall Formation in Arabidopsis. Plant physiology\| PubMed ID: 27566165	2016
Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana. The New phytologist\| PubMed ID: 27588563	2017
Protocol: a fast, comprehensive and reproducible one-step extraction method for the rapid preparation of polar and semi-polar metabolites, lipids, proteins, starch and cell wall polymers fro... Plant methods\| PubMed ID: 27833650	2016
Functional analysis of Brassica napus phloem protein and ribonucleoprotein complexes. The New phytologist\| PubMed ID: 28052459	2017
Lipidome determinants of maximal lifespan in mammals. Scientific reports\| PubMed ID: 28127055	2017
Changes in Lipidome Composition during Brain Development in Humans, Chimpanzees, and Macaque Monkeys. Molecular biology and evolution\| PubMed ID: 28158622	2017
Bioinformatic and expression analysis of the Brassica napus L. cyclophilins. Scientific reports\| PubMed ID: 28473712	2017
Alzheimer's brains show inter-related changes in RNA and lipid metabolism. Neurobiology of disease\| PubMed ID: 28630030	2017
Dynamics of lipids and metabolites during the cell cycle of Chlamydomonas reinhardtii. The Plant journal : for cell and molecular biology\| PubMed ID: 28742931	2017
Regulatory-associated protein of TOR (RAPTOR) alters the hormonal and metabolic composition of Arabidopsis seeds, controlling seed morphology, viability and germination potential. The Plant journal : for cell and molecular biology\| PubMed ID: 28845535	2017
Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. The New phytologist\| PubMed ID: 28906562	2018
The target of rapamycin kinase affects biomass accumulation and cell cycle progression by altering carbon/nitrogen balance in synchronized Chlamydomonas reinhardtii cells. The Plant journal : for cell and molecular biology\| PubMed ID: 29172247	2018
Comprehensive Metabolomics Studies of Plant Developmental Senescence. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 29392679	2018
Comparative Metabolomics Approach Detects Stress-Specific Responses during Coral Bleaching in Soft Corals. Journal of proteome research\| PubMed ID: 29671321	2018
RAPTOR Controls Developmental Growth Transitions by Altering the Hormonal and Metabolic Balance. Plant physiology\| PubMed ID: 29686055	2018
Imaging Mass Spectrometry for Characterization of Atrial Fibrillation Subtypes. Proteomics. Clinical applications\| PubMed ID: 29754423	2018
Semi-targeted Lipidomics of Plant Acyl Lipids Using UPLC-HR-MS in Combination with a Data-Independent Acquisition Mode. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 29761436	2018
Lipidome Evolution in Mammalian Tissues. Molecular biology and evolution\| PubMed ID: 29762743	2018
Inhibition of TOR Represses Nutrient Consumption, Which Improves Greening after Extended Periods of Etiolation. Plant physiology\| PubMed ID: 30049747	2018
Target of Rapamycin Inhibition in Triggers de Novo Amino Acid Synthesis by Enhancing Nitrogen Assimilation. The Plant cell\| PubMed ID: 30228127	2018
Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. Plant, cell & environment\| PubMed ID: 30548618	2019
Chloroplast competition is controlled by lipid biosynthesis in evening primroses. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 30833407	2019
Limited nitrogen availability has cultivar-dependent effects on potato tuber yield and tuber quality traits. Food chemistry\| PubMed ID: 30902278	2019