Fedor V. Karginov

Cell Biology and Neuroscience, University of California, Riverside

Affiliated withUniversity of California, Riverside

Research Area

Biography

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 6	2017

Other Publications

Article	Year
The carboxy-terminal domain of the DExDH protein YxiN is sufficient to confer specificity for 23S rRNA. Journal of molecular biology\| PubMed ID: 12460566	2002
Interaction of Escherichia coli DbpA with 23S rRNA in different functional states of the enzyme. Nucleic acids research\| PubMed ID: 15173385	2004
YxiN is a modular protein combining a DEx(D/H) core and a specific RNA-binding domain. The Journal of biological chemistry\| PubMed ID: 16118224	2005
The domain of the Bacillus subtilis DEAD-box helicase YxiN that is responsible for specific binding of 23S rRNA has an RNA recognition motif fold. RNA (New York, N.Y.)\| PubMed ID: 16611943	2006
A biochemical approach to identifying microRNA targets. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 18042700	2007
Developmentally regulated cleavage of tRNAs in the bacterium Streptomyces coelicolor. Nucleic acids research\| PubMed ID: 18084030	2008
The miR-17~92 cluster collaborates with the Sonic Hedgehog pathway in medulloblastoma. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 19196975	2009
Cell contact-dependent acquisition of cellular and viral nonautonomously encoded small RNAs. Genes & development\| PubMed ID: 19684116	2009
The CRISPR system: small RNA-guided defense in bacteria and archaea. Molecular cell\| PubMed ID: 20129051	2010
Diverse endonucleolytic cleavage sites in the mammalian transcriptome depend upon microRNAs, Drosha, and additional nucleases. Molecular cell\| PubMed ID: 20620951	2010
RNA biology in a test tube--an overview of in vitro systems/assays. Wiley interdisciplinary reviews. RNA\| PubMed ID: 22447682	2012
Site identification in high-throughput RNA-protein interaction data. Bioinformatics (Oxford, England)\| PubMed ID: 23024010	2012
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. Genes & development\| PubMed ID: 23824327	2013
Measuring mRNA Translation by Polysome Profiling. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 26965262	2016
Immunoblot screening of CRISPR/Cas9-mediated gene knockouts without selection. BMC molecular biology\| PubMed ID: 27038923	2016
Induction and suppression of antiviral RNA interference by influenza A virus in mammalian cells. Nature microbiology\| PubMed ID: 27918527	2016
Transcriptome-wide microRNA and target dynamics in the fat body during the gonadotrophic cycle of Aedes aegypti. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 28223504	2017