Clarissa J. Nobile

Department of Molecular and Cell Biology, UNIVERSITY OF CALIFORNIA, MERCED

Affiliated withUNIVERSITY OF CALIFORNIA, MERCED

Research Area

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JoVE Journal Publications

ArticleTotal : 3	Year
Publication title Cited by 15	2017
Publication title Cited by 9	2022
Publication title	2026

Other Publications

Article	Year
A histone deacetylase complex mediates biofilm dispersal and drug resistance in Candida albicans. mBio\| PubMed ID: 24917598	2014
Genome-Wide Chromatin Immunoprecipitation in Candida albicans and Other Yeasts. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 26483022	2016
Candida albicans Biofilms and Human Disease. Annual review of microbiology\| PubMed ID: 26488273	2015
Candida albicans biofilms: development, regulation, and molecular mechanisms. Microbes and infection\| PubMed ID: 26806384	2016
Global Identification of Biofilm-Specific Proteolysis in Candida albicans. mBio\| PubMed ID: 27624133	2016
Assessment and Optimizations of Candida albicans In Vitro Biofilm Assays. Antimicrobial agents and chemotherapy\| PubMed ID: 28289028	2017
The planarian Schmidtea mediterranea is a new model to study host-pathogen interactions during fungal infections. Developmental and comparative immunology\| PubMed ID: 30571995	2019
Imaging of Candida albicans Hyphal Growth via Atomic Force Microscopy. mSphere\| PubMed ID: 33148826	2020
Discovery of a "white-gray-opaque" tristable phenotypic switching system in candida albicans: roles of non-genetic diversity in host adaptation. PLoS biology\| PubMed ID: 24691005	2014
Valley fever: danger lurking in a dust cloud. Microbes and infection\| PubMed ID: 25038397	2014
Anaerobic bacteria grow within Candida albicans biofilms and induce biofilm formation in suspension cultures. Current biology : CB\| PubMed ID: 25308076	2014
White cells facilitate opposite- and same-sex mating of opaque cells in Candida albicans. PLoS genetics\| PubMed ID: 25329547	2014
N-Acetylglucosamine-Induced Cell Death in Candida albicans and Its Implications for Adaptive Mechanisms of Nutrient Sensing in Yeasts. mBio\| PubMed ID: 26350972	2015
Molecular Characterization of the N-Acetylglucosamine Catabolic Genes in Candida africana, a Natural N-Acetylglucosamine Kinase (HXK1) Mutant. PloS one\| PubMed ID: 26808192	2016
Ssn6 Defines a New Level of Regulation of White-Opaque Switching in Candida albicans and Is Required For the Stochasticity of the Switch. mBio\| PubMed ID: 26814177	2016
S-nitrosomycothiol reductase and mycothiol are required for survival under aldehyde stress and biofilm formation in Mycobacterium smegmatis. IUBMB life\| PubMed ID: 27321674	2016
Lactic acid bacteria differentially regulate filamentation in two heritable cell types of the human fungal pathogen Candida albicans. Molecular microbiology\| PubMed ID: 27479705	2016
S. oralis activates the Efg1 filamentation pathway in C. albicans to promote cross-kingdom interactions and mucosal biofilms. Virulence\| PubMed ID: 28481721	2017
Distinct roles of the 7-transmembrane receptor protein Rta3 in regulating the asymmetric distribution of phosphatidylcholine across the plasma membrane and biofilm formation in Candida albic... Cellular microbiology\| PubMed ID: 28745020	2017
Integration of the tricarboxylic acid (TCA) cycle with cAMP signaling and Sfl2 pathways in the regulation of CO2 sensing and hyphal development in Candida albicans. PLoS genetics\| PubMed ID: 28787458	2017
Whole RNA-Sequencing and Transcriptome Assembly of Candida albicans and Candida africana under Chlamydospore-Inducing Conditions. Genome biology and evolution\| PubMed ID: 28810711	2017
The Candida albicans HIR histone chaperone regulates the yeast-to-hyphae transition by controlling the sensitivity to morphogenesis signals. Scientific reports\| PubMed ID: 28814742	2017
Development and regulation of single- and multi-species Candida albicans biofilms. Nature reviews. Microbiology\| PubMed ID: 29062072	2018
Methodologies for and evaluation of efficacy of antifungal and antibiofilm agents and surface coatings against fungal biofilms. Microbial cell (Graz, Austria)\| PubMed ID: 29992128	2018
In Vitro Culturing and Screening of Candida albicans Biofilms. Current protocols in microbiology\| PubMed ID: 29995344	2018
Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California. PloS one\| PubMed ID: 30763377	2019
Antifungal Activity of Mammalian Serum Amyloid A1 against . Antimicrobial agents and chemotherapy\| PubMed ID: 31685470	2019
Unraveling How Forms Sexual Biofilms. Journal of fungi (Basel, Switzerland)\| PubMed ID: 31952361	2020
Genetic regulation of the development of mating projections in . Emerging microbes & infections\| PubMed ID: 32079510	2020
The Als3 Cell Wall Adhesin Plays a Critical Role in Human Serum Amyloid A1-Induced Cell Death and Aggregation in Candida albicans. Antimicrobial agents and chemotherapy\| PubMed ID: 32205353	2020
A Selective Serotonin Reuptake Inhibitor, a Proton Pump Inhibitor, and Two Calcium Channel Blockers Inhibit Biofilms. Microorganisms\| PubMed ID: 32443498	2020
Combination of Antifungal Drugs and Protease Inhibitors Prevent Biofilm Formation and Disrupt Mature Biofilms. Frontiers in microbiology\| PubMed ID: 32523574	2020
The emerging field of venom-microbiomics for exploring venom as a microenvironment, and the corresponding Initiative for Venom Associated Microbes and Parasites (iVAMP). Toxicon: X\| PubMed ID: 32550573	2019
Interactions of microorganisms with host mucins: a focus on Candida albicans. FEMS microbiology reviews\| PubMed ID: 32627827	2020
An expanded cell wall damage signaling network is comprised of the transcription factors Rlm1 and Sko1 in Candida albicans. PLoS genetics\| PubMed ID: 32639995	2020
N-Acetylglucosamine (GlcNAc) Sensing, Utilization, and Functions in . Journal of fungi (Basel, Switzerland)\| PubMed ID: 32784532	2020
Transcriptional regulation of the caspofungin-induced cell wall damage response in Candida albicans. Current genetics\| PubMed ID: 32876716	2020
Candida auris: Epidemiology, biology, antifungal resistance, and virulence. PLoS pathogens\| PubMed ID: 33091071	2020
A Screen for Small Molecules to Target Biofilms. Journal of fungi (Basel, Switzerland)\| PubMed ID: 33375490	2020
Transcriptional Circuits Regulating Developmental Processes in . Frontiers in cellular and infection microbiology\| PubMed ID: 33425784	2020
The Roles of Chromatin Accessibility in Regulating the White-Opaque Phenotypic Switch. Journal of fungi (Basel, Switzerland)\| PubMed ID: 33435404	2021
Filamentous growth is a general feature of Candida auris clinical isolates. Medical mycology\| PubMed ID: 33485272	2021
Epithelial Infection With Elicits a Multi-System Response in Planarians. Frontiers in microbiology\| PubMed ID: 33519792	2020
Into the wild-Exploring the life cycles of yeasts. Yeast (Chichester, England)\| PubMed ID: 33565640	2021
Visible Lights Combined with Photosensitizing Compounds Are Effective against Candida albicans Biofilms. Microorganisms\| PubMed ID: 33652865	2021
Mathematical modeling of the Candida albicans yeast to hyphal transition reveals novel control strategies. PLoS computational biology\| PubMed ID: 33780439	2021
Evolution of the complex transcription network controlling biofilm formation in species. eLife\| PubMed ID: 33825680	2021
Photodynamic Therapy Is Effective Against Biofilms. Frontiers in cellular and infection microbiology\| PubMed ID: 34540717	2021
AddTag, a two-step approach with supporting software package that facilitates CRISPR/Cas-mediated precision genome editing. G3 (Bethesda, Md.)\| PubMed ID: 34544122	2021
A Markerless CRISPR-Mediated System for Genome Editing in Candida auris Reveals a Conserved Role for Cas5 in the Caspofungin Response. Microbiology spectrum\| PubMed ID: 34730409	2021
A case of candidemia in Xiamen, China, and a comparative analysis of clinical isolates in China. Mycology\| PubMed ID: 35186414	2022
infections in China. Virulence\| PubMed ID: 35441578	2022
Mucin O-glycans are natural inhibitors of Candida albicans pathogenicity. Nature chemical biology\| PubMed ID: 35668191	2022
Editorial: Women in fungal pathogenesis 2021. Frontiers in cellular and infection microbiology\| PubMed ID: 36405971	2022
Antifungal drug-resistance mechanisms in Candida biofilms. Current opinion in microbiology\| PubMed ID: 36436326	2023
A Computational Workflow for Analysis of 3' Tag-Seq Data. Current protocols\| PubMed ID: 36779816	2023
The catheterized bladder environment promotes Efg1- and Als1-dependent infection. Science advances\| PubMed ID: 36867691	2023
Clinical isolates of Candida auris with enhanced adherence and biofilm formation due to genomic amplification of ALS4. PLoS pathogens\| PubMed ID: 36913408	2023
Atmospheric humidity regulates same-sex mating in Candida albicans through the trehalose and osmotic signaling pathways. Science China. Life sciences\| PubMed ID: 37118508	2023
Worldwide emergence of fluconazole-resistant Candida parapsilosis: current framework and future research roadmap. The Lancet. Microbe\| PubMed ID: 37121240	2023
Adhesins Als1 and Hwp1 Modulate Interactions with . Microorganisms\| PubMed ID: 37374893	2023
A Planarian Model System to Study Host-Pathogen Interactions. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 37428381	2023
Broad susceptibility of strains to 8-hydroxyquinolines and mechanisms of resistance. mBio\| PubMed ID: 37493629	2023
Inferring gene regulatory networks using transcriptional profiles as dynamical attractors. PLoS computational biology\| PubMed ID: 37607190	2023
Systematic identification and characterization of five transcription factors mediating the oxidative stress response in Candida albicans. Microbial pathogenesis\| PubMed ID: 38145792	2024
-associated hospitalizations and outbreaks, China, 2018-2023. Emerging microbes & infections\| PubMed ID: 38238874	2024
Evaluation of outbreak persistence caused by multidrug-resistant and echinocandin-resistant using multidimensional experimental and epidemiological approaches. Emerging microbes & infections\| PubMed ID: 38380673	2024
Rapid evolution of an adaptive multicellular morphology of Candida auris during systemic infection. Nature communications\| PubMed ID: 38493178	2024
The bacillithiol pathway is required for biofilm formation in Staphylococcus aureus. Microbial pathogenesis\| PubMed ID: 38649100	2024
SNP-SVant: A Computational Workflow to Predict and Annotate Genomic Variants in Organisms Lacking Benchmarked Variants. Current protocols\| PubMed ID: 38717471	2024
species complex: emerging fungal pathogens of the Metschnikowiaceae clade. Zoonoses (Shannon, Ireland)\| PubMed ID: 39238892	2023
A comparative evaluation of CRISPR-Cas9 allele editing systems in : challenging research in a challenging bug. bioRxiv : the preprint server for biology\| PubMed ID: 39829791	2025
The Vps21 signalling pathway regulates white-opaque switching and mating in . Mycology\| PubMed ID: 40083411	2025
Rapid spread of Candida auris in China after COVID-19. The Journal of infection\| PubMed ID: 40122247	2025
An agricultural triazole induces genomic instability and haploid cell formation in the human fungal pathogen Candida tropicalis. PLoS biology\| PubMed ID: 40168394	2025
Candida auris cells form giant lipid droplets to survive in harsh environments. Communications biology\| PubMed ID: 40404799	2025
Hxk1 influences expression of metabolic- and virulence-related genes. mSphere\| PubMed ID: 40996045	2025
A systematic comparison of CRISPR-Cas9 allele editing in Candida auris demonstrates unreliable cassette integration and effective episomal plasmid-based editing. Scientific reports\| PubMed ID: 41062549	2025
induces H₂O₂-mediated epithelial cell death and enhances virulence in oropharyngeal candidiasis. mSphere\| PubMed ID: 41474336	2026
Profound cell wall remodeling in during systemic infection confers simultaneous tolerance to echinocandins and host immunity. Microbiology spectrum\| PubMed ID: 41685898	2026
The glutathione pathway is required for biofilm formation in . Current research in microbial sciences\| PubMed ID: 41716695	2026
The emerging pathogen Candida auris: host interactions and disease drivers. Journal of biomedical science\| PubMed ID: 41723420	2026
A review of the venom microbiome and its utility in ecology and evolution including future directions for emerging research. Symbiosis (Philadelphia, Pa.)\| PubMed ID: 41821950	2025
Correction: The emerging pathogen Candida auris: host interactions and disease drivers. Journal of biomedical science\| PubMed ID: 41851726	2026