dynamic-digital-biomarkers-motor-cognitive-function-parkinson-s

Dynamic Digital Biomarkers of Motor and Cognitive Function in Parkinson's Disease

As Parkinson&#8217;s disease (PD) is a heterogeneous disorder, personalized medicine is truly required to optimize care. In their current form, standard ...

Rutgers University

The variability inherently present in biophysical data is partly contributed by disparate sampling resolutions across instrumentations. This poses a potential problem for statistical inference using pooled data in open access repositories. Such repositories combine data collected from multiple research sites using variable sampling resolutions. One example is the Autism Brain Imaging Data Exchange repository containing thousands of imaging and demographic records from participants in the spectrum of autism and age-matched neurotypical controls. Further, statistical analyses of groups from different diagnoses and demographics may be challenging, owing to the disparate number of participants across different clinical subgroups. In this paper, we examine the noise signatures of head motion data extracted from resting state fMRI data harnessed under different sampling resolutions. We characterize the quality of the noise in the variability of the raw linear and angular speeds for different clinical phenotypes in relation to age-matched controls. Further, we use bootstrapping methods to ensure compatible group sizes for statistical comparison and report the ranges of physical involuntary head excursions of these groups. We conclude that different sampling rates do affect the quality of noise in the variability of head motion data and, consequently, the type of random process appropriate to characterize the time series data. Further, given a qualitative range of noise, from pink to brown noise, it is possible to characterize different clinical subtypes and distinguish them in relation to ranges of neurotypical controls. These results may be of relevance to the pre-processing stages of the pipeline of analyses of resting state fMRI data, whereby head motion enters the criteria to clean imaging data from motion artifacts.

Characterization of Noise Signatures of Involuntary Head Motion in the Autism Brain Imaging Data Exchange Repository.

Wearable biosensors, such as those embedded in smart phones, can provide data to assess neuro-motor control in mobile settings, at homes, schools, workplaces and clinics. However, because most machine learning algorithms currently used to analyze such data require several steps that depend on human heuristics, the analyses become computationally expensive and rather subjective. Further, there is no standardized scale or set of tasks amenable to take advantage of such technology in ways that permit broad dissemination and reproducibility of results. Indeed, there is a critical need for fully objective automated analytical methods that easily handle the deluge of data these sensors output, while providing standardized scales amenable to apply across large sections of the population, to help promote personalized-mobile medicine. Here we use an open-access data set from Kaggle.com to illustrate the use of a new statistical platform and standardized data types applied to smart phone accelerometer and gyroscope data from 30 participants, performing six different activities. We report full distinction without confusion of the activities from the Kaggle set using a single parameter (linear acceleration or angular speed). We further extend the use of our platform to characterize data from commercially available smart shoes, using gait patterns within a set of experiments that probe nervous systems functioning and levels of motor control.

Article	Year
Characterization of Noise Signatures of Involuntary Head Motion in the Autism Brain Imaging Data Exchange Repository. Frontiers in integrative neuroscience\| PubMed ID: 29556179	2018
Statistical Platform for Individualized Behavioral Analyses Using Biophysical Micro-Movement Spikes. Sensors (Basel, Switzerland)\| PubMed ID: 29596342	2018

Joe Vero

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