Ioannis Kakadiaris

Computational Biomedicine Lab, University of Houston

Affiliated withUniversity of Houston Novum, Karolinska Institutet

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 5	2020

Other Publications

Article	Year
Hybrid segmentation framework for tissue images containing gene expression data. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 16685853	2005
Towards automatic reconstruction of dendrite morphology from live neurons. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference\| PubMed ID: 17272057	2004
Frames-Based Denoising in 3D Confocal Microscopy Imaging. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference\| PubMed ID: 17282170	2005
Performance Evaluation of Abdominal Fat Burden Quantification in CT. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference\| PubMed ID: 17282946	2005
Three-dimensional face recognition in the presence of facial expressions: an annotated deformable model approach. IEEE transactions on pattern analysis and machine intelligence\| PubMed ID: 17299221	2007
Learning-based segmentation framework for tissue images containing gene expression data. IEEE transactions on medical imaging\| PubMed ID: 17518066	2007
Automated pericardial fat quantification in CT data. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference\| PubMed ID: 17946011	2006
One-class acoustic characterization applied to blood detection in IVUS. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18051060	2007
Image-based gating of intravascular ultrasound pullback sequences. IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society\| PubMed ID: 18693497	2008
Denoising for 3-d photon-limited imaging data using nonseparable filterbanks. IEEE transactions on image processing : a publication of the IEEE Signal Processing Society\| PubMed ID: 19004704	2008
Subdivision meshes for organizing spatial biomedical data. Methods (San Diego, Calif.)\| PubMed ID: 19664714	2010
Automated pipeline for atlas-based annotation of gene expression patterns: application to postnatal day 7 mouse brain. Methods (San Diego, Calif.)\| PubMed ID: 19698790	2010
Computer-aided non-contrast CT-based quantification of pericardial and thoracic fat and their associations with coronary calcium and Metabolic Syndrome. Atherosclerosis\| PubMed ID: 19748623	2010
Functional morphology analysis of the left anterior descending coronary artery in EBCT images. IEEE transactions on bio-medical engineering\| PubMed ID: 20176530	2010
A supervised classification-based method for coronary calcium detection in non-contrast CT. The international journal of cardiovascular imaging\| PubMed ID: 20229312	2010
Toward the automatic detection of coronary artery calcification in non-contrast computed tomography data. The international journal of cardiovascular imaging\| PubMed ID: 20232154	2010
An inverse scattering algorithm for the segmentation of the luminal border on intravascular ultrasound data. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20426195	2009
Accurate landmarking of three-dimensional facial data in the presence of facial expressions and occlusions using a three-dimensional statistical facial feature model. IEEE transactions on systems, man, and cybernetics. Part B, Cybernetics : a publication of the IEEE Systems, Man, and Cybernetics Society\| PubMed ID: 21622076	2011
Towards extra-luminal blood detection from intravascular ultrasound radio frequency data. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 22003642	2011
Automatic segmentation of time-lapse microscopy images depicting a live Dharma embryo. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference\| PubMed ID: 22256217	2011
Lossless 3-D reconstruction and registration of semi-quantitative gene expression data in the mouse brain. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference\| PubMed ID: 22256218	2011
Analysis of contrast-enhanced intravascular ultrasound images for the assessment of coronary plaque neoangiogenesis: another step closer to the identification of the vulnerable plaque. Current pharmaceutical design\| PubMed ID: 22352774	2012
Landmark/Image-based Deformable Registration of Gene Expression Data. Proceedings. IEEE Computer Society Conference on Computer Vision and Pattern Recognition\| PubMed ID: 22388864	2011
Automated, foot-bone registration using subdivision-embedded atlases for spatial mapping of bone mineral density. Journal of digital imaging\| PubMed ID: 23090209	2013
Similarity-based appearance-prior for fitting a subdivision mesh in gene expression images. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 23285598	2012
Probabilistic segmentation of the lumen from intravascular ultrasound radio frequency data. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 23286080	2012
Segmentation of zebrafish embryonic images using a geometric atlas deformation. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference\| PubMed ID: 23366804	2012
Segmentation of the luminal border in intravascular ultrasound B-mode images using a probabilistic approach. Medical image analysis\| PubMed ID: 23490618	2013
Standardized evaluation methodology and reference database for evaluating IVUS image segmentation. Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society\| PubMed ID: 24012215	2014
3D dense local point descriptors for mouse brain gene expression images. Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society\| PubMed ID: 24786719	2014
Identification of environmental chemicals that induce yolk malabsorption in zebrafish using automated image segmentation. Reproductive toxicology (Elmsford, N.Y.)\| PubMed ID: 25462786	2015
PDM-ENLOR for segmentation of mouse brain gene expression images. Medical image analysis\| PubMed ID: 25476414	2015
Automatic Morphological Reconstruction of Neurons from Multiphoton and Confocal Microscopy Images Using 3D Tubular Models. Neuroinformatics\| PubMed ID: 25631538	2015
Markov Random Field-based Fitting of a Subdivision-based Geometric Atlas. Proceedings. IEEE International Conference on Computer Vision\| PubMed ID: 26561477	2011
Multi-scale segmentation of neurons based on one-class classification. Journal of neuroscience methods\| PubMed ID: 27038663	2016
A novel method for imaging the pharmacological effects of antibiotic treatment on Clostridium difficile. Anaerobe\| PubMed ID: 27108094	2016
A physics-based intravascular ultrasound image reconstruction method for lumen segmentation. Computers in biology and medicine\| PubMed ID: 27235803	2016
An exploratory decision tree analysis to predict physical activity compliance rates in breast cancer survivors. Ethnicity & health\| PubMed ID: 28922931	2019
Computational imaging of aortic vasa vasorum and neovascularization in rabbits using contrast-enhanced intravascular ultrasound: Association with histological analysis. Anatolian journal of cardiology\| PubMed ID: 30088486	2018
Artificial Intelligence and Family Medicine: Better Together. Family medicine\| PubMed ID: 31914179	2020