Yinjie J. Tang

Department of Energy, Washington University

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 53	2012

Other Publications

Article	Year
Evaluating factors that influence microbial phenanthrene biodegradation rates by regression with categorical variables. Chemosphere\| PubMed ID: 15792671	2005
Controlled release of nitrate and sulfate to enhance anaerobic bioremediation of phenanthrene in marine sediments. Environmental science & technology\| PubMed ID: 15926591	2005
Evaluation of the effects of various culture conditions on Cr(VI) reduction by Shewanella oneidensis MR-1 in a novel high-throughput mini-bioreactor. Biotechnology and bioengineering\| PubMed ID: 16732598	2006
Depth-related influences on biodegradation rates of phenanthrene in polluted marine sediments of Puget Sound, WA. Marine pollution bulletin\| PubMed ID: 16780896	2006
A kinetic model describing Shewanella oneidensis MR-1 growth, substrate consumption, and product secretion. Biotechnology and bioengineering\| PubMed ID: 16865732	2007
Shewanella oneidensis MR-1 fluxome under various oxygen conditions. Applied and environmental microbiology\| PubMed ID: 17098921	2007
Anaerobic central metabolic pathways in Shewanella oneidensis MR-1 reinterpreted in the light of isotopic metabolite labeling. Journal of bacteriology\| PubMed ID: 17114268	2007
Charge-associated effects of fullerene derivatives on microbial structural integrity and central metabolism. Nano letters\| PubMed ID: 17288489	2007
Mathematical analysis of the whole core injection method accuracy for measuring phenanthrene biodegradation rates in undisturbed marine sediments. Chemosphere\| PubMed ID: 17412394	2007
Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe(III)-nitrilotriacetic acid. Applied and environmental microbiology\| PubMed ID: 17468285	2007
Isotopomer distributions in amino acids from a highly expressed protein as a proxy for those from total protein. Analytical chemistry\| PubMed ID: 18179240	2008
Separation and mass spectrometry in microbial metabolomics. Current opinion in microbiology\| PubMed ID: 18538626	2008
Analysis of metabolic pathways and fluxes in a newly discovered thermophilic and ethanol-tolerant Geobacillus strain. Biotechnology and bioengineering\| PubMed ID: 19016470	2009
Advances in analysis of microbial metabolic fluxes via (13)C isotopic labeling. Mass spectrometry reviews\| PubMed ID: 19025966	2009
Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism. Biotechnology and bioengineering\| PubMed ID: 19031428	2009
Central metabolism in Mycobacterium smegmatis during the transition from O2-rich to O2-poor conditions as studied by isotopomer-assisted metabolite analysis. Biotechnology letters\| PubMed ID: 19357814	2009
Characterization of the central metabolic pathways in Thermoanaerobacter sp. strain X514 via isotopomer-assisted metabolite analysis. Applied and environmental microbiology\| PubMed ID: 19525270	2009
Investigation of carbon metabolism in "Dehalococcoides ethenogenes" strain 195 by use of isotopomer and transcriptomic analyses. Journal of bacteriology\| PubMed ID: 19525347	2009
Invariability of central metabolic flux distribution in Shewanella oneidensis MR-1 under environmental or genetic perturbations. Biotechnology progress\| PubMed ID: 19610125	2009
Carbohydrate metabolism and carbon fixation in Roseobacter denitrificans OCh114. PloS one\| PubMed ID: 19794911	2009
Alternative isoleucine synthesis pathway in cyanobacterial species. Microbiology (Reading, England)\| PubMed ID: 19875435	2010
Study of stationary phase metabolism via isotopomer analysis of amino acids from an isolated protein. Biotechnology progress\| PubMed ID: 19899123	2010
Bacterial responses to Cu-doped TiO(2) nanoparticles. The Science of the total environment\| PubMed ID: 19931887	2010
Comparative eco-toxicities of nano-ZnO particles under aquatic and aerosol exposure modes. Environmental science & technology\| PubMed ID: 20102184	2010
Mixotrophic and photoheterotrophic metabolism in Cyanothece sp. ATCC 51142 under continuous light. Microbiology (Reading, England)\| PubMed ID: 20430816	2010
Anti-microbial activities of aerosolized transition metal oxide nanoparticles. Chemosphere\| PubMed ID: 20478610	2010
Carbon flow of heliobacteria is related more to clostridia than to the green sulfur bacteria. The Journal of biological chemistry\| PubMed ID: 20807773	2010
Metabolic flux analysis of the mixotrophic metabolisms in the green sulfur bacterium Chlorobaculum tepidum. The Journal of biological chemistry\| PubMed ID: 20937805	2010
Viability and metal reduction of Shewanella oneidensis MR-1 under CO2 stress: implications for ecological effects of CO2 leakage from geologic CO2 sequestration. Environmental science & technology\| PubMed ID: 21058700	2010
Evaluating Factors That Influence Microbial Synthesis Yields by Linear Regression with Numerical and Ordinal Variables. Biotechnology and bioengineering\| PubMed ID: 21077138	2010
Nanoparticles facilitate gene delivery to microorganisms via an electrospray process. Journal of microbiological methods\| PubMed ID: 21144867	2011
Bridging the gap between fluxomics and industrial biotechnology. Journal of biomedicine & biotechnology\| PubMed ID: 21274256	2010
Evaluating factors that influence microbial synthesis yields by linear regression with numerical and ordinal variables. Biotechnology and bioengineering\| PubMed ID: 21404262	2011
Statistics-based model for prediction of chemical biosynthesis yield from Saccharomyces cerevisiae. Microbial cell factories\| PubMed ID: 21689458	2011
Evaluation of isotope discrimination in (13)C-based metabolic flux analysis. Analytical biochemistry\| PubMed ID: 21745456	2011
Cu-doped TiO(2) nanoparticles enhance survival of Shewanella oneidensis MR-1 under ultraviolet light (UV) exposure. The Science of the total environment\| PubMed ID: 21855961	2011
Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications. Frontiers in microbiology\| PubMed ID: 21866228	2011
Selective utilization of exogenous amino acids by Dehalococcoides ethenogenes strain 195 and its effects on growth and dechlorination activity. Applied and environmental microbiology\| PubMed ID: 21890673	2011
Role of dopant concentration, crystal phase and particle size on microbial inactivation of Cu-doped TiO2 nanoparticles. Nanotechnology\| PubMed ID: 21918299	2011
Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields. Applied and environmental microbiology\| PubMed ID: 21948836	2011
Integrating Flux Balance Analysis into Kinetic Models to Decipher the Dynamic Metabolism of Shewanella oneidensis MR-1. PLoS computational biology\| PubMed ID: 22319437	2012