Maya Shamir

Department of Cell and Developmental Biology, Hebrew University of Jerusalem

Affiliated withHebrew University of Jerusalem

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 4	2013

Other Publications

Article	Year
Ras inhibits endoplasmic reticulum stress in human cancer cells with amplified Myc. International journal of cancer. Journal international du cancer\| PubMed ID: 19998334	2010
Towards accurate imputation of quantitative genetic interactions. Genome biology\| PubMed ID: 20003301	2009
Chronic obstructive parotitis due to strictures of Stenson's duct--our treatment experience with sialoendoscopy. Journal of oral and maxillofacial surgery : official journal of the American Association of Oral and Maxillofacial Surgeons\| PubMed ID: 20006159	2010
Localization and registration accuracy in image guided neurosurgery: a clinical study. International journal of computer assisted radiology and surgery\| PubMed ID: 20033601	2009
Biometric identification using knee X-rays. International journal of biometrics\| PubMed ID: 20046910	2009
Assessing the quality of whole genome alignments in bacteria. Advances in bioinformatics\| PubMed ID: 20049164	2009
Understanding gene sequence variation in the context of transcription regulation in yeast. PLoS genetics\| PubMed ID: 20066030	2010
Nitazoxanide inhibits biofilm production and hemagglutination by enteroaggregative Escherichia coli strains by blocking assembly of AafA fimbriae. Antimicrobial agents and chemotherapy\| PubMed ID: 20086145	2010
Characterization of the order-disorder dielectric transition in the hybrid organic-inorganic perovskite-like formate Mn(HCOO)(3)[(CH(3))(2)NH(2)]. Inorganic chemistry\| PubMed ID: 20095567	2010
Cost effectiveness of mass screening for coeliac disease is determined by time-delay to diagnosis and quality of life on a gluten-free diet. Alimentary pharmacology & therapeutics\| PubMed ID: 20096017	2010
Symposium overview: Do we all eat breakfast and is it important? Critical reviews in food science and nutrition\| PubMed ID: 20112150	2010
The relevance of breakfast: concluding remarks. Critical reviews in food science and nutrition\| PubMed ID: 20112155	2010
Expander: from expression microarrays to networks and functions. Nature protocols\| PubMed ID: 20134430	2010
Different sets of QTLs influence fitness variation in yeast. Molecular systems biology\| PubMed ID: 20160707	2010
Automatic morphological classification of galaxy images. Monthly notices of the Royal Astronomical Society\| PubMed ID: 20161594	2009
Computed tomographic analysis of calvarial hyperostosis in captive lions. Veterinary radiology & ultrasound : the official journal of the American College of Veterinary Radiology and the International Veterinary Radiology Association\| PubMed ID: 20166390	2010
Minimally perturbing a gene regulatory network to avoid a disease phenotype: the glioma network as a test case. BMC systems biology\| PubMed ID: 20184733	2010
Molecular and cellular characterization of Neuregulin-1 type IV isoforms. Journal of neurochemistry\| PubMed ID: 20218976	2010
Diagnostic and prognostic value of serum creatine-kinase activity in ill cats: a retrospective study of 601 cases. Journal of feline medicine and surgery\| PubMed ID: 20236849	2010
Dropout, early termination and detachment from a public psychiatric clinic. Psychiatria Danubina\| PubMed ID: 20305590	2010
Islands as nanometric probes of strain distribution in heterogeneous surfaces. Physical review letters\| PubMed ID: 20366775	2010
Topology-free querying of protein interaction networks. Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 20377443	2010
DHPLC screening for mutations in progressive familial intrahepatic cholestasis patients. Journal of human genetics\| PubMed ID: 20414253	2010
[Recommendations for the diagnosis and management of pediatric acute gastroenteritis in Israel]. Harefuah\| PubMed ID: 20422843	2010
An Image Informatics Method for Automated Quantitative Analysis of Phenotype Visual Similarities. IEEE/NIH Life Science Systems and Applications Workshop. IEEE/NIH Life Science Systems and Applications Workshop\| PubMed ID: 20431693	2009
Practical approach to paediatric enteral nutrition: a comment by the ESPGHAN committee on nutrition. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 20453670	2010
Are treatment targets for hypercholesterolemia evidence based? Systematic review and meta-analysis of randomised controlled trials. Archives of disease in childhood\| PubMed ID: 20515970	2010
A plasma-membrane E-MAP reveals links of the eisosome with sphingolipid metabolism and endosomal trafficking. Nature structural & molecular biology\| PubMed ID: 20526336	2010
Towards computational prediction of microRNA function and activity. Nucleic acids research\| PubMed ID: 20576699	2010
The role of duodenal bulb biopsy in the diagnosis of celiac disease in children. Journal of clinical gastroenterology\| PubMed ID: 20628309	2011
Successful medical management of lumbar intervertebral disc prolapse in a ferret. The Journal of small animal practice\| PubMed ID: 20630019	2010
A faster algorithm for simultaneous alignment and folding of RNA. Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 20649420	2010
Automatic classification of lymphoma images with transform-based global features. IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society\| PubMed ID: 20659835	2010
Evidence-based recommendations for bowel cleansing before colonoscopy in children: a report from a national working group. Endoscopy\| PubMed ID: 20669091	2010
Progression analysis and stage discovery in continuous physiological processes using image computing. EURASIP journal on bioinformatics & systems biology\| PubMed ID: 20672025	2010
Does cosmic weather affect infant mortality rate? Journal of environmental health\| PubMed ID: 20687328	2010
Novel automatic endotracheal position confirmation system: mannequin model algorithm evaluation. Journal of clinical monitoring and computing\| PubMed ID: 20706778	2010
Plasmonic resonance scattering from silver nanowire illuminated by tightly focused singular beam. Optics letters\| PubMed ID: 20717438	2010
A Note on the Fixed Parameter Tractability of the Gene-Duplication Problem. IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM\| PubMed ID: 20733245	2011
Regeneration of the transected rat sciatic nerve after suturing or adhesion with cyanoacrylate glue. Journal of neurosurgery\| PubMed ID: 20799860	2011
Geometrical analysis of registration errors in point-based rigid-body registration using invariants. Medical image analysis\| PubMed ID: 20800534	2011
A method for planning safe trajectories in image-guided keyhole neurosurgery. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20879432	2010
DEGAS: de novo discovery of dysregulated pathways in human diseases. PloS one\| PubMed ID: 20976054	2010
Coding "what" and "when" in the Archer fish retina. PLoS computational biology\| PubMed ID: 21079682	2010
Nutrition and growth in inflammatory bowel disease. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 21088534	2010
SPIKE: a database of highly curated human signaling pathways. Nucleic acids research\| PubMed ID: 21097778	2011
Pattern recognition software and techniques for biological image analysis. PLoS computational biology\| PubMed ID: 21124870	2010
Supplementation of infant formula with probiotics and/or prebiotics: a systematic review and comment by the ESPGHAN committee on nutrition. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 21150647	2011
Target and trajectory clinical application accuracy in neuronavigation. Neurosurgery\| PubMed ID: 21206305	2011
Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture. Cell stem cell\| PubMed ID: 21211785	2011
Scattering of singular beams by subwavelength objects. Applied optics\| PubMed ID: 21221157	2011
Antibody response to influenza vaccine in pediatric liver transplant recipients. The Pediatric infectious disease journal\| PubMed ID: 21248658	2011
Age and gender differences in urea breath test results. European journal of clinical investigation\| PubMed ID: 21261618	2011
Follow-up of children with celiac disease - lost in translation? Digestion\| PubMed ID: 21282953	2011
Material classification of nanoparticles by focused beam scattering. Applied optics\| PubMed ID: 21283232	2011
Urine flow is a novel hemodynamic monitoring tool for the detection of hypovolemia. Anesthesia and analgesia\| PubMed ID: 21304150	2011
A computer analysis method for correlating knee X-rays with continuous indicators. International journal of computer assisted radiology and surgery\| PubMed ID: 21373920	2011
Effect of oral insulin on diabetes-induced intestinal mucosal growth in rats. Digestive diseases and sciences\| PubMed ID: 21374061	2011
PrtT-regulated proteins secreted by Aspergillus fumigatus activate MAPK signaling in exposed A549 lung cells leading to necrotic cell death. PloS one\| PubMed ID: 21412410	2011
Nutrition in early life: malnutrition, obesity, and special needs of premature babies. Current opinion in clinical nutrition and metabolic care\| PubMed ID: 21415730	2011
Pruritus responsive to naltrexone in a patient with cholestatic liver disease. The Israel Medical Association journal : IMAJ\| PubMed ID: 21443039	2011
HDL promotes rapid atherosclerosis regression in mice and alters inflammatory properties of plaque monocyte-derived cells. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 21482781	2011
Integration of transcriptomics, proteomics, and microRNA analyses reveals novel microRNA regulation of targets in the mammalian inner ear. PloS one\| PubMed ID: 21483685	2011
Body mass index and weight-for-length ratio references for infants born at 33-42 weeks gestation: a new tool for anthropometric assessment. Clinical nutrition (Edinburgh, Scotland)\| PubMed ID: 21524833	2011
Physiological aspects of human milk lipids and implications for infant feeding: a workshop report. Acta paediatrica (Oslo, Norway : 1992)\| PubMed ID: 21535133	2011
Automatic endotracheal tube position confirmation system based on image classification--a preliminary assessment. Medical engineering & physics\| PubMed ID: 21555232	2011
Preface: 2nd Satellite Meeting on Bioinformatics Education, Research in Computational Molecular Biology (RECOMB-BE 2010). Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 21563980	2011
Role of dietary factors and food habits in the development of childhood obesity: a commentary by the ESPGHAN Committee on Nutrition. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 21593641	2011
Assessing the efficacy of low-level image content descriptors for computer-based fluorescence microscopy image analysis. Journal of microscopy\| PubMed ID: 21605118	2011
Central venous catheter-induced cardiac tamponade: a preventable complication. Anesthesia and analgesia\| PubMed ID: 21613198	2011
Absorption enhancement by matching the cross-section of plasmonic nanowires to the field structure of tightly focused beams. Optics express\| PubMed ID: 21643100	2011
Spatiotemporal effects of microsaccades on population activity in the visual cortex of monkeys during fixation. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 21653284	2012
Conserved interneuron-specific ErbB4 expression in frontal cortex of rodents, monkeys, and humans: implications for schizophrenia. Biological psychiatry\| PubMed ID: 21664604	2011
Level of function at discharge as a predictor of readmission among inpatients with schizophrenia. The American journal of occupational therapy : official publication of the American Occupational Therapy Association\| PubMed ID: 21675337	2011
[Eosinophilic esophagitis--the experience in a tertiary pediatric center]. Harefuah\| PubMed ID: 21678636	2011
Association of cerebrospinal fluid analysis findings with clinical signs and outcome in acute nonambulatory thoracolumbar disc disease in dogs. Journal of veterinary internal medicine / American College of Veterinary Internal Medicine\| PubMed ID: 21689153	2011
Supplementation of N-3 LCPUFA to the diet of children older than 2 years: a commentary by the ESPGHAN Committee on Nutrition. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 21694531	2011
First spike latency code for interaural phase difference discrimination in the guinea pig inferior colliculus. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 21697370	2011
Large-scale analysis of chromosomal aberrations in cancer karyotypes reveals two distinct paths to aneuploidy. Genome biology\| PubMed ID: 21714908	2011
Coeliac disease diagnosis: ESPGHAN 1990 criteria or need for a change? Results of a questionnaire. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 21716133	2012
Selection of dark modes in resonators with conical reflectors. Applied optics\| PubMed ID: 21743507	2011
Transcriptional modulation induced by ionizing radiation: p53 remains a central player. Molecular oncology\| PubMed ID: 21795128	2011
Large-mode-area fused-fiber combiners, with nearly lowest-mode brightness conservation. Optics letters\| PubMed ID: 21808343	2011
Celiac disease screening assays for children younger than 3 years of age: the performance of three serological tests. Digestive diseases and sciences\| PubMed ID: 21847565	2012
Detecting highways of horizontal gene transfer. Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 21899418	2011
A novel candidate cis-regulatory motif pair in the promoters of germline and oogenesis genes in C. elegans. Genome research\| PubMed ID: 21930893	2012
A single subanesthetic dose of ketamine relieves depression-like behaviors induced by neuropathic pain in rats. Anesthesiology\| PubMed ID: 21934410	2011
Automatic computerized endotracheal tube position verification: an animal model evaluation. Anesthesia and analgesia\| PubMed ID: 21965369	2011
The current status of continuous noninvasive measurement of total, carboxy, and methemoglobin concentration. Anesthesia and analgesia\| PubMed ID: 21965370	2012
Tissue transglutaminase antibodies in celiac disease: focus on the pediatric population. Drugs of today (Barcelona, Spain : 1998)\| PubMed ID: 21971542	2011
Oral insulin stimulates intestinal epithelial cell turnover following massive small bowel resection in a rat and a cell culture model. Pediatric surgery international\| PubMed ID: 21986618	2012
Critical systematic review of the level of evidence for routine use of probiotics for reduction of mortality and prevention of necrotizing enterocolitis and sepsis in preterm infants. Clinical nutrition (Edinburgh, Scotland)\| PubMed ID: 21996513	2012
The chromatin-binding protein HMGN1 regulates the expression of methyl CpG-binding protein 2 (MECP2) and affects the behavior of mice. The Journal of biological chemistry\| PubMed ID: 22009741	2011
A point mutation in translation initiation factor eIF2B leads to function--and time-specific changes in brain gene expression. PloS one\| PubMed ID: 22073122	2011
Re: ESPGHAN's 2008 recommendation for early introduction of complementary foods: how good is the evidence? (Cattaneo et al. 2011). Maternal & child nutrition\| PubMed ID: 22136224	2012
Fiducial optimization for minimal target registration error in image-guided neurosurgery. IEEE transactions on medical imaging\| PubMed ID: 22156977	2012
Statins promote the regression of atherosclerosis via activation of the CCR7-dependent emigration pathway in macrophages. PloS one\| PubMed ID: 22163030	2011
Spontaneous normalization of anti-tissue transglutaminase antibody levels is common in children with type 1 diabetes mellitus. Digestive diseases and sciences\| PubMed ID: 22173747	2012
Burden of celiac disease in the Mediterranean area. World journal of gastroenterology : WJG\| PubMed ID: 22174546	2011
European Society for Pediatric Gastroenterology, Hepatology, and Nutrition guidelines for the diagnosis of coeliac disease. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 22197856	2012
Wavelength conversion of nanosecond pulses to the mid-IR in photonic crystal fibers. Optics letters\| PubMed ID: 22212798	2012
Constructing logical models of gene regulatory networks by integrating transcription factor-DNA interactions with expression data: an entropy-based approach. Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 22216865	2012
Inverse association between Helicobacter pylori and pediatric asthma in a high-prevalence population. Helicobacter\| PubMed ID: 22221613	2012
Transient infantile hypertriglyceridemia, fatty liver, and hepatic fibrosis caused by mutated GPD1, encoding glycerol-3-phosphate dehydrogenase 1. American journal of human genetics\| PubMed ID: 22226083	2012
Archer fish fast hunting maneuver may be guided by directionally selective retinal ganglion cells. The European journal of neuroscience\| PubMed ID: 22288480	2012
Balancing feed-forward excitation and inhibition via Hebbian inhibitory synaptic plasticity. PLoS computational biology\| PubMed ID: 22291583	2012
The importance of the NRG-1/ErbB4 pathway for synaptic plasticity and behaviors associated with psychiatric disorders. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 22378872	2012
Conformationally locked chromophores as models of excited-state proton transfer in fluorescent proteins. Journal of the American Chemical Society\| PubMed ID: 22404323	2012
Automatic detection of melanoma progression by histological analysis of secondary sites. Cytometry. Part A : the journal of the International Society for Analytical Cytology\| PubMed ID: 22467531	2012
Long-term outcome of tumor necrosis factor alpha antagonist's treatment in pediatric Crohn's disease. Journal of Crohn's & colitis\| PubMed ID: 22483567	2013
Transcriptional and proteomic analysis of the Aspergillus fumigatus Î”prtT protease-deficient mutant. PloS one\| PubMed ID: 22514608	2012
MGMR: leveraging RNA-Seq population data to optimize expression estimation. BMC bioinformatics\| PubMed ID: 22537041	2012
Spatial beam properties of combined lasers' delivery fibers. Optics letters\| PubMed ID: 22555688	2012
Reduced risk trajectory planning in image-guided keyhole neurosurgery. Medical physics\| PubMed ID: 22559661	2012
Growth and metabolic control in patients withÂ type 1 diabetes and celiac disease: a longitudinal observational case-control study. Pediatric diabetes\| PubMed ID: 22564209	2012
Malnutrition screening tools for hospitalized children. Current opinion in clinical nutrition and metabolic care\| PubMed ID: 22588189	2012
Can feeding practices during infancy change the risk for celiac disease? The Israel Medical Association journal : IMAJ\| PubMed ID: 22624444	2012
Central venous catheter-induced cardiac tamponade: a preventable complication. The journal of vascular access\| PubMed ID: 22653833	2012
Documentation of functional and clinical effects of infant nutrition: setting the scene for COMMENT. Annals of nutrition & metabolism\| PubMed ID: 22677876	2012
Network-induced classification kernels for gene expression profile analysis. Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 22697242	2012
Quality and safety aspects of infant nutrition. Annals of nutrition & metabolism\| PubMed ID: 22699763	2012
Thiamine-deficient infant formula: what happened and what have we learned? Annals of nutrition & metabolism\| PubMed ID: 22699764	2012
Fast coding of orientation in primary visual cortex. PLoS computational biology\| PubMed ID: 22719237	2012
PoseShop: Human Image Database Construction and Personalized Content Synthesis. IEEE transactions on visualization and computer graphics\| PubMed ID: 22732681	2012
Minute-to-minute urine flow rate variability: a new renal physiology variable. Anesthesia and analgesia\| PubMed ID: 22763907	2012
Needle biopsy for hepatic vitamin A levels in lions (Panthera leo). Journal of zoo and wildlife medicine : official publication of the American Association of Zoo Veterinarians\| PubMed ID: 22779221	2012
Microelectrode recording duration and spatial density constraints for automatic targeting of the subthalamic nucleus. Stereotactic and functional neurosurgery\| PubMed ID: 22854414	2012
Systematic review: early infant feeding and the prevention of coeliac disease. Alimentary pharmacology & therapeutics\| PubMed ID: 22905651	2012
ECM microenvironment regulates collective migration and local dissemination in normal and malignant mammary epithelium. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 22923691	2012
Modeling the evolution of spatial beam parameters in parabolic index fibers. Optics letters\| PubMed ID: 22940974	2012
Detection Motion Through Dynamic Refraction. IEEE transactions on pattern analysis and machine intelligence\| PubMed ID: 22962080	2012
Assessment of algorithms for inferring positional weight matrix motifs of transcription factor binding sites using protein binding microarray data. PloS one\| PubMed ID: 23029415	2012
Improving class separability using extended pixel planes: a comparative study. Machine vision and applications\| PubMed ID: 23074356	2012
Detecting motion through dynamic refraction. IEEE transactions on pattern analysis and machine intelligence\| PubMed ID: 23154325	2013
Review article: the management of acute gastroenteritis in children. Alimentary pharmacology & therapeutics\| PubMed ID: 23190209	2013
Effect of High Î²-Palmitate Content in Infant Formula on the Intestinal Microbiota of Term Infants. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 23201699	2013
The MORPH algorithm: ranking candidate genes for membership in Arabidopsis and tomato pathways. The Plant cell\| PubMed ID: 23204403	2012
Systematic inference of highways of horizontal gene transfer in prokaryotes. Bioinformatics (Oxford, England)\| PubMed ID: 23335015	2013
Postmarketing pharmaceutical product pitfalls in trauma care. Anesthesiology clinics\| PubMed ID: 23351545	2013
The magnocellular visual pathway and facial emotion misattribution errors in schizophrenia. Progress in neuro-psychopharmacology & biological psychiatry\| PubMed ID: 23369884	2013
Half a century of optics in computing--a personal perspective [Invited]. Applied optics\| PubMed ID: 23385897	2013
Intensive intermittent physical therapy in infants with cerebral palsy: a randomized controlled pilot study. The Israel Medical Association journal : IMAJ\| PubMed ID: 23393711	2012
World Review of Nutrition and Dietetics. Nutrition and growth. Introduction. World review of nutrition and dietetics\| PubMed ID: 23428673	2013
Nutrition and growth in inflammatory bowel disease. World review of nutrition and dietetics\| PubMed ID: 23428695	2013
RAP: Accurate and Fast Motif Finding Based on Protein-Binding Microarray Data. Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 23464877	2013
Vitamin D in the Healthy Paediatric Population: A Position Paper by the ESPGHAN Committee on Nutrition. Journal of pediatric gastroenterology and nutrition\| PubMed ID: 23471181	2013
Prenatal and postnatal nutrition: impact on child health. Current opinion in clinical nutrition and metabolic care\| PubMed ID: 23481149	2013
Motion-Aware Gradient Domain Video Composition. IEEE transactions on image processing : a publication of the IEEE Signal Processing Society\| PubMed ID: 23481851	2013
Dissection of Regulatory Networks that Are Altered in Disease via Differential Co-expression. PLoS computational biology\| PubMed ID: 23505361	2013
Modeling the evolution of spatial beam parameters in parabolic index fibers: erratum. Optics letters\| PubMed ID: 23546245	2013
Hypogammaglobulinemia in the early period after liver transplantation in children. Clinical transplantation\| PubMed ID: 23551332	2013