Bradford W. Gibson

Buck Institute for Age Research

Affiliated withBuck Institute for Age Research

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 13	2009

Other Publications

Article	Year
Intracellular survival of Neisseria gonorrhoeae in male urethral epithelial cells: importance of a hexaacyl lipid A. Infection and immunity\| PubMed ID: 11796626	2002
Haemophilus influenzae type b strain A2 has multiple sialyltransferases involved in lipooligosaccharide sialylation. The Journal of biological chemistry\| PubMed ID: 11842084	2002
The lbgAB gene cluster of Haemophilus ducreyi encodes a beta-1,4-galactosyltransferase and an alpha-1,6-DD-heptosyltransferase involved in lipooligosaccharide biosynthesis. Infection and immunity\| PubMed ID: 12010972	2002
Characterization of lipooligosaccharides from Haemophilus ducreyi containing polylactosamine repeats. Journal of the American Society for Mass Spectrometry\| PubMed ID: 12056572	2002
Identification and characterization of the N-acetylglucosamine glycosyltransferase gene of Haemophilus ducreyi. Infection and immunity\| PubMed ID: 12228324	2002
The msbB mutant of Neisseria meningitidis strain NMB has a defect in lipooligosaccharide assembly and transport to the outer membrane. Infection and immunity\| PubMed ID: 12540541	2003
Characterization of the human heart mitochondrial proteome. Nature biotechnology\| PubMed ID: 12592411	2003
Metabolic incorporation of unnatural sialic acids into Haemophilus ducreyi lipooligosaccharides. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 12615992	2003
An alternative strategy to determine the mitochondrial proteome using sucrose gradient fractionation and 1D PAGE on highly purified human heart mitochondria. Journal of proteome research\| PubMed ID: 12645917	2002
Primary sequence characterization of catestatin intermediates and peptides defines proteolytic cleavage sites utilized for converting chromogranin a into active catestatin secreted from neur... Biochemistry\| PubMed ID: 12795588	2003
MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides. Journal of the American Society for Mass Spectrometry\| PubMed ID: 12892908	2003
Phosphospecific proteolysis for mapping sites of protein phosphorylation. Nature biotechnology\| PubMed ID: 12923550	2003
Molecular components of a cell death pathway activated by endoplasmic reticulum stress. The Journal of biological chemistry\| PubMed ID: 14561754	2004
Identification of a 3-deoxy-D-manno-octulosonic acid biosynthetic operon in Moraxella catarrhalis and analysis of a KdsA-deficient isogenic mutant. Infection and immunity\| PubMed ID: 14573664	2003
Proteome of Haemophilus ducreyi by 2-D SDS-PAGE and mass spectrometry: strain variation, virulence, and carbohydrate expression. Journal of proteome research\| PubMed ID: 14582649	2003
The Streptococcus gordonii platelet binding protein GspB undergoes glycosylation independently of export. Journal of bacteriology\| PubMed ID: 14729688	2004
Proteomic and immunochemical characterization of a role for stathmin in adult neurogenesis. FASEB journal : official publication of the Federation of American Societies for Experimental Biology\| PubMed ID: 14769823	2004
Exploiting proteomics in the discovery of drugs that target mitochondrial oxidative damage. Science of aging knowledge environment : SAGE KE\| PubMed ID: 15028863	2004
Expanded coverage of the human heart mitochondrial proteome using multidimensional liquid chromatography coupled with tandem mass spectrometry. Journal of proteome research\| PubMed ID: 15253431	2004
Matrix-assisted laser desorption/ionization-time of flight-mass spectrometry of lipopolysaccharide species separated by slab-polyacrylamide gel electrophoresis: high-resolution separation an... Electrophoresis\| PubMed ID: 15273999	2004
Novel modification of lipid A of Francisella tularensis. Infection and immunity\| PubMed ID: 15322031	2004
Lipophilic regulator of a developmental switch in Caenorhabditis elegans. Aging cell\| PubMed ID: 15569358	2004
Rapid purification and mass spectrometric characterization of mitochondrial NADH dehydrogenase (Complex I) from rodent brain and a dopaminergic neuronal cell line. Molecular & cellular proteomics : MCP\| PubMed ID: 15591592	2005
The human mitochondrial proteome: oxidative stress, protein modifications and oxidative phosphorylation. The international journal of biochemistry & cell biology\| PubMed ID: 15743667	2005
Characterization of a cluster of three glycosyltransferase enzymes essential for Moraxella catarrhalis lipooligosaccharide assembly. Journal of bacteriology\| PubMed ID: 15838019	2005
Mass spectrometric identification of a novel phosphorylation site in subunit NDUFA10 of bovine mitochondrial complex I. FEBS letters\| PubMed ID: 15848193	2005
Biochemical and functional characterization of membrane blebs purified from Neisseria meningitidis serogroup B. The Journal of biological chemistry\| PubMed ID: 16103114	2005
Novel sialic acid transporter of Haemophilus influenzae. Infection and immunity\| PubMed ID: 16113244	2005
Proteomic analysis of succinate dehydrogenase and ubiquinol-cytochrome c reductase (Complex II and III) isolated by immunoprecipitation from bovine and mouse heart mitochondria. Biochimica et biophysica acta\| PubMed ID: 16120479	2006
Identification of a novel sialic acid transporter in Haemophilus ducreyi. Infection and immunity\| PubMed ID: 16177350	2005
Stable isotope metabolic labeling of Neisseria meningitidis lipooligosaccharide. Journal of endotoxin research\| PubMed ID: 16690012	2006
Huntingtin phosphorylation sites mapped by mass spectrometry. Modulation of cleavage and toxicity. The Journal of biological chemistry\| PubMed ID: 16782707	2006
DAF-12-dependent rescue of dauer formation in Caenorhabditis elegans by (25S)-cholestenoic acid. Aging cell\| PubMed ID: 16913876	2006
Role of lgtC in resistance of nontypeable Haemophilus influenzae strain R2866 to human serum. Infection and immunity\| PubMed ID: 16966407	2006
Identification of genes involved in the expression of atypical lipooligosaccharide structures from a second class of Haemophilus ducreyi. Infection and immunity\| PubMed ID: 17030566	2007
Novel pathways associated with quinone-induced stress in breast cancer cells. Drug metabolism reviews\| PubMed ID: 17145690	2006
Characterization of lipid A acylation patterns in Francisella tularensis, Francisella novicida, and Francisella philomiragia using multiple-stage mass spectrometry and matrix-assisted laser ... Analytical chemistry\| PubMed ID: 17263332	2007
Quantification of cysteine oxidation in human estrogen receptor by mass spectrometry. Analytical chemistry\| PubMed ID: 17373775	2007
Small-scale immunopurification of cytochrome c oxidase for a high-throughput multiplexing analysis of enzyme activity and amount. Biotechnology and applied biochemistry\| PubMed ID: 17508937	2007
Proposed second class of Haemophilus ducreyi strains show altered protein and lipooligosaccharide profiles. Proteomics\| PubMed ID: 17676659	2007
Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils. Proteome science\| PubMed ID: 17692124	2007
Identification of LpxL, a late acyltransferase of Francisella tularensis. Infection and immunity\| PubMed ID: 17724076	2007
Regulation of sialic acid transport and catabolism in Haemophilus influenzae. Molecular microbiology\| PubMed ID: 17880422	2007
Characterization of the N-acetyl-5-neuraminic acid-binding site of the extracytoplasmic solute receptor (SiaP) of nontypeable Haemophilus influenzae strain 2019. The Journal of biological chemistry\| PubMed ID: 17947229	2008
Characterization of htrB and msbB mutants of the light organ symbiont Vibrio fischeri. Applied and environmental microbiology\| PubMed ID: 18065606	2008
Partial acetylation of lysine residues improves intraprotein cross-linking. Analytical chemistry\| PubMed ID: 18201069	2008
A novel serine phosphorylation site detected in the N-terminal domain of estrogen receptor isolated from human breast cancer cells. Journal of the American Society for Mass Spectrometry\| PubMed ID: 18367407	2008
Systematic mapping of posttranslational modifications in human estrogen receptor-alpha with emphasis on novel phosphorylation sites. Molecular & cellular proteomics : MCP\| PubMed ID: 18984578	2009
IDPicker 2.0: Improved protein assembly with high discrimination peptide identification filtering. Journal of proteome research\| PubMed ID: 19522537	2009
Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma. Nature biotechnology\| PubMed ID: 19561596	2009
Calpain-1 cleaves and activates caspase-7. The Journal of biological chemistry\| PubMed ID: 19617626	2009
Preferentially increased nitration of alpha-synuclein at tyrosine-39 in a cellular oxidative model of Parkinson's disease. Analytical chemistry\| PubMed ID: 19697948	2009
The Mycobacterium bovis bacille Calmette-Guerin phagosome proteome. Molecular & cellular proteomics : MCP\| PubMed ID: 19815536	2010
Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses. Molecular & cellular proteomics : MCP\| PubMed ID: 19837981	2010
Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance. Molecular & cellular proteomics : MCP\| PubMed ID: 19858499	2010
Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry. Journal of proteome research\| PubMed ID: 19921851	2010
Sweetening the pot: adding glycosylation to the biomarker discovery equation. Clinical chemistry\| PubMed ID: 19959616	2010
Utilizing the O-antigen lipopolysaccharide biosynthesis pathway in Escherichia coli to interrogate the substrate specificities of exogenous glycosyltransferase genes in a combinatorial appro... Glycobiology\| PubMed ID: 20208062	2010
Targeted quantitation of site-specific cysteine oxidation in endogenous proteins using a differential alkylation and multiple reaction monitoring mass spectrometry approach. Molecular & cellular proteomics : MCP\| PubMed ID: 20233844	2010
ErbB2 trafficking and degradation associated with K48 and K63 polyubiquitination. Cancer research\| PubMed ID: 20406983	2010
Identification, characterization and immunogenicity of an O-antigen capsular polysaccharide of Francisella tularensis. PloS one\| PubMed ID: 20625403	2010
A lectin affinity workflow targeting glycosite-specific, cancer-related carbohydrate structures in trypsin-digested human plasma. Analytical biochemistry\| PubMed ID: 20705048	2011
Identification of new modulators and protein alterations in non-apoptotic programmed cell death. Journal of cellular biochemistry\| PubMed ID: 20830744	2010
Quantitative mapping of reversible mitochondrial Complex I cysteine oxidation in a Parkinson disease mouse model. The Journal of biological chemistry\| PubMed ID: 21196577	2011
The lipid A from Vibrio fischeri lipopolysaccharide: a unique structure bearing a phosphoglycerol moiety. The Journal of biological chemistry\| PubMed ID: 21498521	2011
Confident identification of 3-nitrotyrosine modifications in mass spectral data across multiple mass spectrometry platforms. Journal of proteomics\| PubMed ID: 21514405	2011
N-acylethanolamine signalling mediates the effect of diet on lifespan in Caenorhabditis elegans. Nature\| PubMed ID: 21562563	2011
Mass spectrometric identification of novel lysine acetylation sites in huntingtin. Molecular & cellular proteomics : MCP\| PubMed ID: 21685499	2011
Life span extension via eIF4G inhibition is mediated by posttranscriptional remodeling of stress response gene expression in C. elegans. Cell metabolism\| PubMed ID: 21723504	2011
Proteomic analysis of age-dependent changes in protein solubility identifies genes that modulate lifespan. Aging cell\| PubMed ID: 22103665	2012
Regulatory control or oxidative damage? Proteomic approaches to interrogate the role of cysteine oxidation status in biological processes. Molecular & cellular proteomics : MCP\| PubMed ID: 22159599	2011
The O-antigen and core carbohydrate of Vibrio fischeri lipopolysaccharide: Composition and analysis of their role in Euprymna scolopes light organ colonization. The Journal of biological chemistry\| PubMed ID: 22247546	2012