Richard M. Murray

Department of Bioengineering, California Institute of Technology

Affiliated withCalifornia Institute of Technology

Research Area

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JoVE Journal Publications

ArticleTotal : 2	Year
Publication title Cited by 375	2013
Publication title Cited by 7	2021

Other Publications

Article	Year
Regulatory activity revealed by dynamic correlations in gene expression noise. Nature genetics\| PubMed ID: 19029898	2008
Dynamics and stability of a class of low Reynolds number swimmers near a wall. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 19518287	2009
Flight dynamics and control of evasive maneuvers: the fruit fly's takeoff. IEEE transactions on bio-medical engineering\| PubMed ID: 19643699	2009
Controlling biological networks by time-delayed signals. Philosophical transactions. Series A, Mathematical, physical, and engineering sciences\| PubMed ID: 20008410	2010
Autonomous driving in urban environments: approaches, lessons and challenges. Philosophical transactions. Series A, Mathematical, physical, and engineering sciences\| PubMed ID: 20819826	2010
Synergistic dual positive feedback loops established by molecular sequestration generate robust bimodal response. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 23150580	2012
Discriminating external and internal causes for heading changes in freely flying Drosophila. PLoS computational biology\| PubMed ID: 23468601	2013
Linear DNA for rapid prototyping of synthetic biological circuits in an Escherichia coli based TX-TL cell-free system. ACS synthetic biology\| PubMed ID: 24303785	2014
Rapidly characterizing the fast dynamics of RNA genetic circuitry with cell-free transcription-translation (TX-TL) systems. ACS synthetic biology\| PubMed ID: 24621257	2015
Flying Drosophila stabilize their vision-based velocity controller by sensing wind with their antennae. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 24639532	2014
Gene circuit performance characterization and resource usage in a cell-free "breadboard". ACS synthetic biology\| PubMed ID: 24670245	2014
Synthetic circuit for exact adaptation and fold-change detection. Nucleic acids research\| PubMed ID: 24728988	2014
Design and implementation of a biomolecular concentration tracker. ACS synthetic biology\| PubMed ID: 24847683	2015
Population diversification in a yeast metabolic program promotes anticipation of environmental shifts. PLoS biology\| PubMed ID: 25626086	2015
Characterizing and prototyping genetic networks with cell-free transcription-translation reactions. Methods (San Diego, Calif.)\| PubMed ID: 26022922	2015
An analytical approach to bistable biological circuit discrimination using real algebraic geometry. Journal of the Royal Society, Interface\| PubMed ID: 26109633	2015
Engineering Transcriptional Regulator Effector Specificity Using Computational Design and In Vitro Rapid Prototyping: Developing a Vanillin Sensor. ACS synthetic biology\| PubMed ID: 26262913	2016
Rapid cell-free forward engineering of novel genetic ring oscillators. eLife\| PubMed ID: 26430766	2015
A population-based temporal logic gate for timing and recording chemical events. Molecular systems biology\| PubMed ID: 27193783	2016
Design of a Toolbox of RNA Thermometers. ACS synthetic biology\| PubMed ID: 28437108	2017
Recursively constructing analytic expressions for equilibrium distributions of stochastic biochemical reaction networks. Journal of the Royal Society, Interface\| PubMed ID: 28566513	2017
Biophysical Constraints Arising from Compositional Context in Synthetic Gene Networks. Cell systems\| PubMed ID: 28734826	2017
Cell-free extract based optimization of biomolecular circuits with droplet microfluidics. Lab on a chip\| PubMed ID: 28770936	2017
Stability of Systems with Stochastic Delays and Applications to Genetic Regulatory Networks. SIAM journal on applied dynamical systems\| PubMed ID: 28936130	2016
The effects of time-varying temperature on delays in genetic networks. SIAM journal on applied dynamical systems\| PubMed ID: 29081723	2016
Cell-Free and In Vivo Characterization of Lux, Las, and Rpa Quorum Activation Systems in E. coli. ACS synthetic biology\| PubMed ID: 29120612	2018
On-chip membrane protein cell-free expression enables development of a direct binding assay: A curious case of potassium channel KcsA-Kv1.3. Analytical biochemistry\| PubMed ID: 29936096	2018
Construction of Incoherent Feedforward Loop Circuits in a Cell-Free System and in Cells. ACS synthetic biology\| PubMed ID: 30790525	2019
Hard Limits and Performance Tradeoffs in a Class of Antithetic Integral Feedback Networks. Cell systems\| PubMed ID: 31279505	2019
A method for cost-effective and rapid characterization of engineered T7-based transcription factors by cell-free protein synthesis reveals insights into the regulation of T7 RNA polymerase-d... Archives of biochemistry and biophysics\| PubMed ID: 31326518	2019
Guidelines for designing the antithetic feedback motif. Physical biology\| PubMed ID: 32217822	2020
Assessment of Robustness to Temperature in a Negative Feedback Loop and a Feedforward Loop. ACS synthetic biology\| PubMed ID: 32525658	2020
Analysis of primitive genetic interactions for the design of a genetic signal differentiator. Synthetic biology (Oxford, England)\| PubMed ID: 32995540	2019
Synthetic logic circuits using RNA aptamer against T7 RNA polymerase. Biotechnology journal\| PubMed ID: 33813787	2021
Guiding Ethical Principles in Engineering Biology Research. ACS synthetic biology\| PubMed ID: 33977723	2021
A MATLAB toolbox for modeling genetic circuits in cell-free systems. Synthetic biology (Oxford, England)\| PubMed ID: 33981862	2021