All animal procedures were approved by the University of Missouri-Columbia Institutional Animal Care and Use Committee (Protocol numbers 37561 and 65648), and adhered to the Guide for the Care and Use of Laboratory Animals. Pubertal female pigs (Large White by Landrace crossbred genetic background) were housed in the University of Missouri swine facilities in a room with sexually mature boars for the duration of the study. Animals received age-appropriate standard commercial feed with ad libitum access to water. Body weights varied from 80 to 130 kg. Female pigs were daily monitored for behavioral (i.e., increased vocalization, restlessness, and receptivity to mating response) and physical (i.e., vulvar swelling and mucous discharge) signs of estrus. Animals were considered in active estrus when exhibiting a characteristic immobility response to back pressure and/or boar exposure, defined as standing estrus. Endometriosis was induced in pubertal female pigs 1–2 days after the onset of standing estrus to ensure experimental standardization. Subsequent visualization of ovarian structures, including follicles, corpora hemorrhagica, and corpora lutea, during laparoscopy confirmed the stage of the estrous cycle.
Details of the materials, reagents, and equipment used in this protocol are provided in the Table of Materials.
1. Preparation for live-animal surgery
- Ensure that all surgical and medical instruments are properly sterilized using autoclaving and/or ethylene oxide sterilization.
NOTE: Certain laparoscopic instruments, such as cameras and rigid laparoscopes, are sensitive to heat and moisture; therefore, ethylene oxide sterilization is recommended for these devices. The manufacturer’s instructions should always be consulted to confirm the appropriate sterilization method.
- Fast the animals for at least 12 h prior to surgery to prevent excessive gastrointestinal distension during the procedure.
- Prepare the recovery area by placing a heat lamp and a blanket, as well as instruments to monitor vitals such as a thermometer and a stethoscope.
2. Animal sedation and preparation
- Sedate the animals with an intravenous injection into an ear vein of ketamine (1–4.5 mg/kg) and xylazine (1–2 mg/kg) (combined in one syringe) using an 18-gauge winged infusion set.
- Transfer animals to the operating table and ensure appropriate heat support is provided by using heating pads.
- Place an endotracheal tube with an internal diameter of 8.0–10.5 mm in the animal’s airway. Inflate the cuff to secure the endotracheal tube in place, then connect the tube to the oxygen and gas anesthesia supply.
NOTE: Orotracheal intubation in adult pigs is aided by the use of an extra-long (300 mm) laryngoscope blade, which facilitates access to the laryngeal space.
- Maintain the animals in a surgical plane of general anesthesia using 3–5% isoflurane in 100% oxygen.
NOTE: Although the anesthesia machine used for these procedures is equipped with a mechanical ventilator, the pigs subjected to these procedures to date have maintained spontaneous respiration throughout the procedure and therefore did not require mechanical ventilation. If mechanical ventilation is required, a respiratory rate of 12–20 breaths/min and a tidal volume of 8–10 mL/kg body weight are recommended.
- Apply sterile ophthalmic ointment to prevent corneal dryness.
- Insert an 18–22-gauge peripheral venous catheter into an ear vein and provide 0.9% sodium chloride continuous fluid support at a rate of 2–3 mL/kg/h for the duration of the procedure.
- Position the animal in dorsal recumbency and tie the arms and legs with rope in an extended position.
- Place a monopolar electrocautery grounding pad on shaved skin on the animal’s right flank. Ensure proper contact between the pad and the skin.
- Prepare the surgical field by shaving the abdominal area (from the costal ridge to the pubis and to each inguinal fold), and performing an antiseptic scrub, alternating 10% povidone–iodine solution with 70% isopropyl alcohol applied in concentric circles.
- Cover the animal with a large sterile drape to maintain a sterile field.
3. Animal monitoring, analgesia, and systemic antibiotics
- Monitor and record the animal’s vital signs throughout the procedure, including heart rate, respiratory rate, peripheral oxygen saturation, and body temperature.
NOTE: The use of a standardized surgical record card is highly recommended for monitoring the animal and documenting physiological parameters during the procedure.
- Ensure adequate anesthetic depth before the first incision and throughout the procedure by confirming the absence of palpebral and paw withdrawal reflexes.
- Administer intramuscular injections of flunixin meglumine (50 mg/mL) at a dosage of 2.2 mg/kg and ceftiofur crystalline free acid (100 mg/mL) at a dosage of 5 mg/kg at the start of surgery.
4. Pre-operative and laparoscopic instrument preparation
- Ensure that the surgeon and assistants perform surgical hand antisepsis and don sterile surgical gowns and gloves prior to the surgery.
- Set the surgical tools and laparoscope instruments on a table covered with a sterile drape.
- Transfer the laparoscope camera, rigid laparoscope, light cable, and insufflator tubing to the surgical field.
NOTE: These instruments can be secured to the surgical field drape using Backhaus clamps to prevent accidental displacement.
- With the help of a non-sterile assistant, connect the camera, light cable, and insufflator tubing to their respective towers. Attach the rigid scope to the camera head.
- Connect the light cable and turn on the light source. White balance the camera according to the manufacturer's instructions.
- Connect the monopolar and bipolar cables to their respective forceps.
- With the assistance of a non-sterile assistant, connect the cables to the electrosurgical unit and verify proper function by briefly activating the cautery while touching the forceps to a wet gauze.
- Place the suction/irrigation tubing and probe on the surgical field and connect them to the suction/irrigation system supplied with 0.9% sodium chloride solution.
5. Laparoscopic partial hysterectomy for induction of endometriosis
NOTE: The laparoscopic procedure for partial hysterectomy and autologous transplantation typically takes approximately 2 h, from the initial incision to skin closure; however, the duration may vary depending on the experience of the surgical team.
- Using scissors, create a 20 x 30 cm rectangular opening in the surgical drape and place four Backhaus clamps to secure the surgical drape in place.
- For the first camera port, place two towel clamps approximately 1 cm lateral to each side of the umbilicus and elevate the abdominal wall to safely insert the initial trocar (Figure 1).
- Using a No. 22 scalpel blade, make a 10 mm incision at the midline of the umbilicus. Then, using a straight hemostat, bluntly dissect the subcutaneous tissue.
NOTE: Laparoscopic procedures were performed using a four-port technique consisting of two 10 mm trocars and two 5 mm trocars, as illustrated in Figure 1. Port A (10 mm) was used for the 10 mm laparoscope, whereas ports B (5 mm), C (10 mm), and D (5 mm) were used for surgical instruments.
- While maintaining the skin and abdominal wall lifted, insert the trocar with its cannula and advance it until the peritoneal cavity is entered. Then, remove the trocar and insert the rigid telescope via the cannula.
- Upon confirmation that the peritoneal cavity is breached, connect the insufflator tubing to the cannula and open the stopcock. Induce pneumoperitoneum by pressurizing the abdomen with CO2 up to 12 mmHg.
- Once adequate abdominal insufflation is achieved, tilt the operating table and animal to Trendelenburg position (head approximately 20° below the sacrum).
NOTE: Abdominal insufflation helps create space between the abdominal wall and the viscera, while the Trendelenburg position shifts the viscera cranially. Together, these measures create a safer entry of trocars B, C, and D.
- With the scope inserted in port A, scan the abdominal viscera to assess any pre-existing conditions or bleeding.
- With a scalpel blade, make 5 and 10 mm incisions for placement of trocars B and C, respectively, lateral to the midline (Figure 1). Use the scope to visually guide the placement of trocars, thereby avoiding organ perforation.
NOTE: Depending on animal size and body condition, the trocars and cannulas may need to be angled upon entry into the peritoneal cavity to reduce the risk of perforating organs.
- Repeat the same procedure to insert trocar D (Figure 1).
- Insert atraumatic long-jaw graspers through ports B, C, and D to manipulate the uterine horns and locate the ovaries. Identify and record ovarian structures present (e.g., preovulatory follicles, corpora hemorrhagica, and corpora lutea).
NOTE: If the gastrointestinal tract is compromising visualization of the uterus, use a sweeping motion to carefully sweep the organs away from the operative field.
- Once the right-sided ovary is located, identify the oviduct and the tip of the uterine horn. Grasp the uterine horn about 20 cm from the utero-tubal junction with one or two atraumatic graspers that were inserted through ports C and D.
- Insert the bipolar cautery forceps via port B and cauterize the uterine horn at the site of resection (Figure 2A). Use the monopolar cutting/cautery scissors to cut the uterine horn, ensuring hemostasis (Figure 2B,C).
NOTE: Sequential rounds of bipolar cauterization followed by monopolar cutting are required to achieve complete resection of the uterine horn. The resection area may be irrigated with 0.9% sodium chloride if the tissue becomes dry due to cauterization.
- Grasp the uterine horn approximately 6–10 cm from the first resection site towards the utero-tubal junction. Repeat the procedure described in step 5.12 until the horn is cross-sectioned (Figure 2D,E). Cauterize and cut the mesometrium connecting the two resection sites (Figure 2F–I).
- Examine the resected areas for hemorrhage using camera visualization.
NOTE: This has not occurred to date. However, if bleeding is noted, determine the site of hemorrhage and provide appropriate hemostasis using cautery.
- Insert a laparoscopic specimen retrieval bag via port C and place the resected uterine tissue into the pouch (Figure 3A,B).
- Remove the pouch by cinching the drawstring, bringing the bag neck through the trocar port without the cannula (Figure 3C,D). With the aid of small hemostats, carefully exteriorize the uterine tissue.
NOTE: Depending on the size of the uterine horn, the trocar port incision may need to be enlarged to allow the specimen to be extracted without damage.
- Transfer the uterine tissue to a sterile beaker and proceed with tissue mincing as described in the following section.
- Cover the surgical field with a sterile surgical drape while the tissue is being prepared. This is important to prevent excessive drying and contamination of incision sites.

Figure 1: Trocar port placement on the abdomen. Port A (10 mm) is positioned at the midline of the umbilicus and is used for the laparoscope camera and insufflator. Ports B (5 mm) and C (10 mm) are located 8–10 cm lateral to the midline and caudal to port A. Port D (5 mm) is positioned on the midline, 8–10 cm caudal to ports B and C. Illustration created with BioRender.com. Please click here to view a larger version of this figure.
6. Endometrial fragments preparation and labeling
NOTE: Perform endometrial tissue dissection and mincing in a laminar flow cabinet while wearing sterile surgical gloves to minimize contamination. A detailed description of synthesis and preparation of labeled nanoparticles is described in Omenge et al. (2025)6. Mincing and processing of the tissue typically require 30–60 min, depending on whether ex vivo tissue labeling is performed. Because tissues are processed immediately after retrieval and inoculated immediately following preparation, the expected interval between tissue retrieval and inoculation is approximately 35–60 min.
- Using sterile instruments in a Petri dish, separate the endometrium from the myometrium until approximately 5 g of endometrial tissue is obtained. Mince the endometrial tissue into fragments of approximately 1 mm3 using surgical scissors.
NOTE: Mincing the endometrial tissue into small fragments is critical to prevent clogging of the cannula used to inoculate the fragments back into the peritoneal cavity.
- For labeling, incubate the endometrial fragments in 1.2 mL of the FITC dye-doped silica nanoparticles suspension in a 6-well plate containing 0.8 mL RPMI-1640 medium supplemented with 10% fetal bovine serum, for a total volume of 2 mL. Incubate the tissue in an atmosphere-controlled incubator with 5% CO2 at 37 °C for 30 min.
NOTE: Ex vivo labeling of the tissue is an optional step. Detailed methods for the generation of FITC dye-doped silica nanoparticles and tissue labeling have been previously described in Omenge et al. (2025)6. Additionally, because the current laparoscopic imaging system is equipped only for the detection of indocyanine green (ICG), FITC-labeled tissues and lesions cannot be visualized in vivo and were therefore assessed ex vivo using a fluorescence imaging system, as previously described by Omenge et al. (2025)6.
- Transfer the tissue suspension to a 50 mL conical tube. Transport the tube to the operating room for inoculation into the animal, as described in the following section.
7. Autologous inoculation of endometrial tissue for induction of endometriosis and surgical closure
NOTE: The final inoculum volume is generally 20 mL, including the minced endometrial tissue (approximately 5 g) and culture medium.
- Using a 5 mm diameter sump cannula and a sterile 60 mL syringe, aspirate the endometrial fragment suspension from the 50 mL conical tube and inoculate the tissue into the animal’s pelvic area (i.e., bladder and uterine horns) using port D. Visualize the inoculation location with the scope to ensure complete delivery.
- Before surgical closure, turn off the insufflator, remove trocar cannulas, and manually compress the abdomen to facilitate the escape of CO2 through the incision sites to prevent excessive bloating.
- Close the 10 mm incisions with 1 to 2 simple interrupted sutures in the abdominal (fascia) wall. Approximate the subcutaneous tissue in 10 mm and 5 mm incisions with 1 or 2 buried sutures.
NOTE: Use of a 2-0 absorbable suture with an appropriate surgical needle is recommended.
- Apply skin glue (2-octyl-cyanoacrylate) to fully close the skin.
8. Laparoscopic procedure for surveillance and collection of endometriotic lesions
NOTE: The surveillance procedure typically takes approximately 1 h, from the initial incision to skin closure; however, the duration may vary depending on the experience of the surgical team and how many lesions are found.
- To examine location and progression of endometriotic lesions, perform longitudinal monitoring in induced animals.
NOTE: Timepoints will depend on the research questions. Development of endometriotic lesions has been observed as early as 1 month post-induction in the animals used in these studies.
- Follow the procedures described in sections 2 and 3 for animal sedation, preparation, monitoring and analgesia, and the procedures described in section 4 for operating team and instrument preparation.
- Place trocar ports in the same fashion as described in steps 5.1 through 5.8.
- Upon entering the abdominal cavity, perform a detailed and standardized inspection to examine location and appearance of lesions.
NOTE: Frequent locations of lesion development include the peritoneal wall, the serosa of the bladder, uterus, and intestines. The standard procedure for lesion surveillance consists of systematic laparoscopic examination of the lower pelvic peritoneal wall, beginning on the right side and proceeding to the left side, followed by examination of the left and right abdominal peritoneal walls. The uterine horns are then examined for lesions, followed by the bladder and lower gastrointestinal tract. The entire procedure is recorded laparoscopically to aid in documentation and subsequent analysis. Identified lesions are also imaged laparoscopically to facilitate subsequent assessment, and observations are documented.
- To obtain lesion biopsies, place the biopsy forceps via port B (Figure 1) on top of the selected lesion, open the forceps, and allow the margin to fall into the open jaws. Grasp the lesion by closing the biopsy jaws and, in a single motion, pull the forceps toward the port cannula.
- Transfer the biopsy specimen to a sterile gauze for examination and then place it into a 50 mL conical tube for further processing.
- Ensure that hemostasis is achieved at the biopsy site using camera visualization. Use the bipolar cautery forceps to aid hemostasis if necessary.
- Repeat steps 8.5 through 8.7 to obtain additional lesion biopsies.
NOTE: Lesions have been collected from the peritoneal wall and uterus. Collection of lesions from the intestinal serosa and bladder is not recommended due to the high risk of perforation. Three biopsies per animal per procedure are generally collected, which is sufficient for downstream analyses (e.g., histopathology and molecular analysis).
- Perform surgical closure as described in steps 7.2–7.4.
NOTE: Repeated surveillance procedures were performed at intervals of at least 30 days and were limited to a maximum of three procedures, with the third procedure being terminal, in accordance with the Institutional Animal Care and Use Committee-approved protocol. The repeated-surgery intervals and number of surveillance assessments should be based on study-specific objectives and guided by the investigators’ respective Institutional Animal Care and Use Committee.
9. Animal recovery and post-operative monitoring
- Transfer the animal to a recovery area and provide heat support by using a heating mat or a heat lamp.
- Deflate the endotracheal tube cuff and extubate the animal upon the first signs of protective airway reflexes (e.g., swallowing, chewing, or coughing).
- Monitor the animals and record vitals until they become ambulatory and are returned to their pens. Provide feed and water.
- Administer intramuscular injections of flunixin meglumine (50 mg/mL; 2.2 mg/kg) 24 h after the procedure and as needed thereafter, and ceftiofur crystalline free acid (100 mg/mL; 5 mg/kg) 48 h after the procedure. Provide additional analgesia and antibiotic treatment as needed and outlined in the local Institutional Animal Care and Use Committee protocol and guidelines.
- Monitor the animal daily for 10 days following the procedure. Assess for behavioral changes (e.g., decreased appetite, lethargy, or reduced mobility) and examine incision sites for signs of inflammation (e.g., swelling, redness, warmth to the touch) or infection (e.g., discharge).
10. Study endpoint and euthanasia
NOTE: The study endpoint will vary depending on the objectives of the study. In the initial studies, an endpoint of 6 months post-induction was used.
- For euthanasia, administer an intravenous overdose (25 mL/100 kg of body weight) of pentobarbital sodium and phenytoin sodium solution (390 mg pentobarbital sodium and 50 mg phenytoin sodium per mL).
NOTE: Follow the procedures outlined in the institution’s approved Institutional Animal Care and Use Committee protocol for euthanasia.
- Place the animal in dorsal recumbency and perform a midline abdominal incision.
- Perform a detailed and standardized necropsy to inspect for presence of lesions on pelvic and abdominal organs, as well as on the peritoneal walls.
- Use dissecting scissors and forceps to carefully excise the endometriotic lesions.
NOTE: Lesions can then be fixed for subsequent histopathological processing or snap-frozen for further molecular analyses.