Awake Mouse Imaging

Awake mouse imaging is a neuroscience technique for visualizing brain structure, neural activity, or physiological changes in conscious mice, preserving behaviors and brain states that anesthesia can alter. Researchers typically stabilize the animal with a head-fixation system and use optical or other imaging methods while the mouse receives sensory stimuli or performs a task; motion correction and behavioral monitoring help distinguish neural signals from movement-related artifacts. This approach links cellular and circuit dynamics to perception, learning, decision-making, and disease-related changes. By combining imaging with behavioral analysis, awake mouse studies provide more ecologically relevant insight into brain function and support research on neurological disorders and potential therapies.

Awake Mouse Imaging - Related Videos

Research

JoVE EoE - Neuroimaging

Simultaneous Imaging of Microglial Dynamics and Neuronal Activity in an Awake Mouse

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2025

Source: Maruoka, H., et. al. Simultaneous Imaging of Microglial Dynamics and Neuronal Activity in Awake Mice. J. Vis. Exp. (2022) This video shows a two-photon microscopy procedure for imaging neuronal activity and microglial dynamics in an awake mouse during visual stimulation, highlighting calcium transients and cellular interactions.

Evaluating the Procedure for Performing Awake Cystometry in a Mouse Model

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Cited by 10 •

2017

This study describes the surgical procedures and experimental techniques for performing awake cystometry in a freely moving mouse. In addition, it provides experimental evidence to support its optimization and standardization.

Research

JoVE Journal - Neuroscience
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Multiple-mouse Neuroanatomical Magnetic Resonance Imaging

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Cited by 59 •

2011

Magnetic resonance imaging (MRI) has become an increasingly popular tool for examining the phenotype of genetically altered mice. This article illustrates the methods necessary to achieve high-throughput phenotyping of genetically altered mice using multiple-mouse MRI.

Preparation of an Awake Mouse for Recording Neural Responses and Injecting Tracers

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Cited by 26 •

2012

Electrophysiological characterization of neuronal responses is important for understanding brain function and for guiding the placement of dyes for pathway tracing. However, many studies are performed in anesthetized animals. To understand brain function without anesthetics, we developed a method to record neuronal response properties and inject dyes in awake mouse.

Investigating Auditory Neuronal Responses in an Awake Mouse in the Presence of an Inhibitory Neurotransmitter Blocker

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2025

This video demonstrates the study of neuronal activity in a specific region of the mouse brain that processes auditory stimuli. The technique involves applying an inhibitory neurotransmission blocker and comparing neuronal responses to auditory stimuli before and after the drug is applied to the localized brain region.

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