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Biology
翻译起始的分析在应力条件由多聚核糖体剖析
翻译起始的分析在应力条件由多聚核糖体剖析
JoVE Journal
Biology
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JoVE Journal Biology
Analysis of Translation Initiation During Stress Conditions by Polysome Profiling

翻译起始的分析在应力条件由多聚核糖体剖析

Full Text
18,908 Views
10:59 min
May 19, 2014

DOI: 10.3791/51164-v

Laëtitia Coudert*1,2, Pauline Adjibade*1,2, Rachid Mazroui1,2

1Department of Molecular Biology, Medical Biochemistry, and Pathology, Faculty of Medicine,Laval University, 2CHU de Quebec Research Center

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Please note that some of the translations on this page are AI generated. Click here for the English version.

Overview

This article describes a method for analyzing the effects of stress conditions on the initiation of mRNA translation in eukaryotic cells. The technique involves polysome profiling through sucrose gradient centrifugation to separate translating from non-translating ribosomes.

Key Study Components

Area of Science

  • Neuroscience
  • Cell Biology
  • Translation Mechanisms

Background

  • Understanding mRNA translation is crucial for studying cellular responses to stress.
  • Polysome profiling is a powerful technique to assess translation initiation.
  • Stress conditions can significantly impact protein synthesis in mammalian cells.
  • Traditional methods like metabolic labeling have limitations in assessing translation initiation.

Purpose of Study

  • To measure the effects of stress on translation initiation in mammalian cells.
  • To improve upon existing methods for analyzing ribosomal activity.
  • To provide a detailed protocol for researchers studying translation under stress.

Methods Used

  • Treating mammalian cancer cells with an anti-cancer drug.
  • Preparing cell extracts from treated cells.
  • Creating sucrose gradients for ribosomal separation.
  • Performing ultra centrifugation to isolate ribosomal fractions.
  • Conducting western blot analysis to assess protein association with polysomes.

Main Results

  • The method effectively separates translating and non-translating ribosomes.
  • Stress conditions were shown to alter the initiation of translation.
  • Western blot analysis confirmed the association of specific proteins with polysomes.
  • This technique provides insights into the cellular response to stress.

Conclusions

  • The described method is a valuable tool for studying translation initiation under stress.
  • It offers advantages over traditional metabolic labeling techniques.
  • Future research can build on this method to explore various stress responses in cells.

Frequently Asked Questions

What is polysome profiling?
Polysome profiling is a technique used to analyze the translation of mRNA by separating ribosomes based on their activity.
How does stress affect translation initiation?
Stress can lead to changes in the availability of resources and signaling pathways, impacting the initiation of translation in cells.
What are the advantages of this method over metabolic labeling?
This method allows for direct assessment of translation initiation without the need for metabolic labeling, providing clearer insights into ribosomal activity.
Can this method be applied to other cell types?
Yes, while this study focuses on mammalian cancer cells, the method can be adapted for other eukaryotic cell types.
What is the significance of western blot analysis in this study?
Western blot analysis is used to confirm the presence and association of specific proteins with polysomes, validating the results of the polysome profiling.

在这里,我们描述一个变化来分析真核细胞中的mRNA的翻译的响应于胁迫条件的启动方法。此方法是基于换算从非翻译的核糖体的核糖体的蔗糖梯度的速度分离。

该程序的总体目标是通过多核糖体分析测量应激条件对哺乳动物细胞和组织的翻译、起始的影响。这是通过首先用抗癌药物处理哺乳动物癌细胞,然后制备细胞提取物来实现的。第二步是制作蔗糖、梯度。

接下来,将细胞提取物加载到蔗糖上,梯度,并超速离心以分离核糖体组分。最终,使用特异性抗体进行 western blot 分析以评估测试蛋白质与多核糖体的关联。现有方法(如代谢标记)的这种技术的主要优点是,它允许我们评估应激条件对翻译起始步骤的影响。

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