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JoVE Journal
Neuroscience
激光捕获显微切割分离新鲜冷冻人体肠神经节的优化
激光捕获显微切割分离新鲜冷冻人体肠神经节的优化
JoVE Journal
Neuroscience
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JoVE Journal Neuroscience
Optimization of Laser-Capture Microdissection for the Isolation of Enteric Ganglia from Fresh-Frozen Human Tissue

激光捕获显微切割分离新鲜冷冻人体肠神经节的优化

Full Text
9,111 Views
08:28 min
June 14, 2018

DOI: 10.3791/57762-v

Aaron A. May-Zhang1, Karen K Deal1, E. Michelle Southard-Smith1

1Vanderbilt University Medical Center

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Please note that some of the translations on this page are AI generated. Click here for the English version.

Overview

This study outlines a protocol for extracting high-integrity RNA from enteric ganglia isolated from freshly-resected human intestinal tissue using laser capture microdissection (LCM). The method aims to investigate the expression profiles of the enteric nervous system in human intestines, enhancing our understanding of neural functions within the gastrointestinal tract.

Key Study Components

Area of Science

  • Neuroscience
  • Molecular Biology
  • Gastroenterology

Background

  • The enteric nervous system plays a critical role in gastrointestinal function.
  • High-quality RNA is essential for studying gene expression profiles.
  • Laser capture microdissection allows for precise isolation of cellular structures.
  • This technique facilitates detailed molecular analyses from intact tissue.

Purpose of Study

  • To obtain high yields of RNA from human enteric ganglia.
  • To preserve RNA quality while minimizing tissue damage.
  • To assess gene expression profiles in the human enteric nervous system.

Methods Used

  • Laser capture microdissection (LCM) of enteric ganglia from human tissue samples.
  • Freshly-resected intestinal tissue was processed to isolate ganglia.
  • Critical steps included cryosectioning, staining, and dehydration.
  • RNA extraction followed the LCM techniques to achieve high RNA integrity.

Main Results

  • The protocol yielded over 1 nanogram of high-quality RNA for sequencing.
  • RNA integrity numbers indicated excellent RNA quality suitable for RNA-Seq.
  • More than 95% of samples were sufficient for sequencing analyses.

Conclusions

  • This study demonstrates an effective method for isolating RNA from human enteric ganglia.
  • The results enable deeper insights into the molecular mechanisms of the enteric nervous system.
  • This method has implications for research on gastrointestinal disorders and neural function.

Frequently Asked Questions

What are the advantages of using LCM for RNA extraction?
Laser capture microdissection allows for precise targeting and isolation of specific cell types, minimizing contamination and maximizing RNA quality.
How is the enteric ganglia model implemented in this study?
Enteric ganglia are isolated from freshly-resected human intestinal tissue processed through cryosectioning and LCM to study their gene expression.
What types of data can be obtained using this RNA extraction protocol?
This method enables high-quality RNA for transcriptomic analyses, facilitating the investigation of gene expression dynamics in the enteric nervous system.
How can this method be applied in future research?
The protocol can be adapted to study other tissues or cell types, broadening its applications in neuroscience and molecular biology.
What are some limitations of this approach?
Sample quality, proper handling, and swift processing are crucial to obtaining high integrity RNA; any deviation may affect results.

该协议的目的是获得高完整性的 RNA 样本从无固定的, 新鲜切除的人肠道组织, 利用激光捕获显微切割 (LCM) 分离。该协议包括制备人体肠道组织、cryosectioning、乙醇染色和脱水、LCM 和 RNA 提取的闪光冷冻样品。

这种方法可以帮助回答有关肠道神经系统的关键问题,例如成人肠道中肠神经节的表达谱。该技术的主要优点是可用于从人肠神经节中获得高产量的 RNA,同时最大限度地保持 RNA 质量。从切成 20 厘米长的肠道组织开始。

首先,修剪掉脂肪和结缔组织。避免划伤浆膜,这可能导致肌间神经丛的结构损伤。接下来,沿着修剪后的样品的整个长度做一个纵向切口,最好在肠系膜附着部位。

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神经科学 问题 136 激光捕获显微切割 (LCM) 人肠道组织 肠道 肠神经节 肠道神经系统 rna 提取 甲酚紫染色 rna 序列 (rna 排序)

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