Macroscopic Imaging

Macroscopic imaging refers to methods that visualize biological structures or activity across large tissue areas, making it valuable for studying brain-wide organization in neuroscience. Depending on the modality, cameras or scanners detect emitted light, changes in blood oxygenation, or other signals from the intact brain or exposed tissue, converting them into spatial maps over time. These approaches reveal broad patterns of neural activity, connectivity, and functional specialization that may be missed by cellular-scale techniques. Applications include mapping sensory processing, monitoring disease-related changes, and linking local neural events to large-scale brain dynamics.

Macroscopic Imaging - Related Videos

Research

JoVE Journal - Chemistry

A Technique to Functionalize and Self-assemble Macroscopic Nanoparticle-ligand Monolayer Films onto Template-free Substrates

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2014

A simple, robust and scalable technique to functionalize and self-assemble macroscopic nanoparticle-ligand monolayer films onto template-free substrates is described in this protocol.

Research

JoVE Journal - Engineering
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Preparation of Liquid Crystal Networks for Macroscopic Oscillatory Motion Induced by Light

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Cited by 11 •

2017

The goal of the protocol is to create liquid crystalline polymer films that can mechanically oscillate under continuous light irradiation. We describe in great detail the conception of free-standing films, from the liquid crystal alignment method to the photo-actuation. The experimental protocol applied to prepare this material is broadly applicable.

An Analog Macroscopic Technique for Studying Molecular Hydrodynamic Processes in Dense Gases and Liquids

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Cited by 2 •

2017

An experimentally accessible analog method for studying molecular hydrodynamic processes in dense fluids is presented. The technique uses particle image velocimetry of vibrated, high-restitution grain piles and allows direct, macroscopic observation of dynamical processes known and predicted to exist in strongly interacting, high density gases and liquids.

Using Microwave and Macroscopic Samples of Dielectric Solids to Study the Photonic Properties of Disordered Photonic Bandgap Materials

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2014

Disordered structures offer new mechanisms for forming photonic bandgaps and unprecedented freedom in functional-defect designs. To circumvent the computational challenges of disordered systems, we construct modular macroscopic samples of the new class of PBG materials and use microwaves to characterize their scale-invariant photonic properties, in an easy and inexpensive manner.

In Vivo Imaging of Cerebrospinal Fluid Transport in a Mouse Brain Using Fluorescence Macroscopy

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2025

Source: Sweeney, A. M., et al. In Vivo Imaging of Cerebrospinal Fluid Transport through the Intact Mouse Skull using Fluorescence Macroscopy. J. Vis. Exp. (2019)This video demonstrates the process of visualizing cerebrospinal fluid (CSF) flow in a mouse brain using fluorescence imaging. A fluorescent tracer is injected into the cisterna magna (CM), allowing its movement with CSF to be tracked through the subarachnoid and perivascular spaces. Time-lapse imaging captures the tracer's journey,...

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