Neuronal Subcellular Compartments

Neuronal subcellular compartments are specialized regions within a neuron, including the soma, dendrites, axon, and synaptic terminals, that organize distinct molecular and electrical functions. Their separation allows neurons to target proteins, organelles, signaling molecules, and ion channels to particular locations, while transport along the cytoskeleton and local protein synthesis help maintain compartment-specific properties. In neuroscience, studying these compartments clarifies how neurons receive, integrate, and transmit information, how synapses change during learning, and how compartmental dysfunction contributes to neurodegenerative disease. Imaging, electrophysiology, and molecular labeling can link local structure and activity to whole-cell behavior.

Neuronal Subcellular Compartments - Related Videos

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JoVE EoE - Neuropathology

Measuring Proteasome Activity in Different Subcellular Compartments of the Rat Brain

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2025

This video demonstrates how to measure proteasome activity in different subcellular compartments of the lateral amygdala from fear-conditioned and control rat brains using a fluorogenic peptide assay. The proteasome cleaves the fluorogenic peptide substrate, releasing fluorescent molecules, which are quantified using a plate reader to assess proteasome activity in the nuclear and synaptic protein fractions. Increased nuclear activity suggests changes in gene expression, while reduced synaptic...

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JoVE Journal - Biology
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Methods to Assess Subcellular Compartments of Muscle in C. elegans

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Cited by 30 •

2014

Skeletal muscle is essential for locomotion and is the bodies’ main protein store. Muscle health measurements within C. elegans are described. Prospective changes to muscle structure and function are assessed using localized GFP and cationic dyes.

A Multi-compartment CNS Neuron-glia Co-culture Microfluidic Platform

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Cited by 18 •

2009

We developed a novel multi-compartment neuron co-culture microsystem platform for in vitro CNS axon-glia interaction research. The platform is capable of conducting up to six independent experiments in parallel and was fabricated using a newly developed macro/micro hybrid fabrication method.

Preparation and Maintenance of Dorsal Root Ganglia Neurons in Compartmented Cultures

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Cited by 21 •

2008

Here we describe the technique of preparing and maintaining compartmented chambers for culturing sensory neurons of the dorsal root ganglia.

Imaging Subcellular Calcium Dynamics in Neurons of Caenorhabditis elegans

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2025

Source: Doser, R., et al. Subcellular Imaging of Neuronal Calcium Handling In Vivo. J. Vis. Exp. (2023)This video demonstrates in vivo imaging of subcellular calcium flux in the ventral nerve cord neurons of transgenic Caenorhabditis elegans strains. Two distinct calcium indicators are employed: a cytoplasmic indicator in one strain and a mitochondrial indicator in another. Neurons are observed under a fluorescence microscope to monitor real-time changes in fluorescence intensity within the...

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