Siderophore Isolation

Siderophore isolation is the recovery and purification of small, iron-chelating molecules produced by microorganisms to acquire iron from their surroundings. In biological systems, microbes secrete siderophores that bind ferric iron with high affinity, and researchers isolate these compounds from culture media by separating cells, extracting dissolved metabolites, and applying chromatographic or other purification methods. Characterizing isolated siderophores helps reveal microbial strategies for iron acquisition, communication, and competition. These compounds also support studies of microbial ecology, host-pathogen interactions, environmental chemistry, and potential applications in antimicrobial development, biosensing, and targeted delivery.

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Research

JoVE EoE - Bacterial Growth and Techniques

Isolation of Siderophore-Containing Extracellular Vesicles from Mycobacterium tuberculosis

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2025

Source: Gupta, S., Marcela Rodriguez, G. Isolation and Characterization of Extracellular Vesicles Produced by Iron-limited Mycobacteria. J. Vis. Exp. (2019)This video demonstrates the stepwise isolation of extracellular vesicles (EVs) from Mycobacterium tuberculosis cultured under iron-limiting conditions that mimic the host environment. It outlines the use of ultrafiltration, differential centrifugation, and density gradient separation to enrich and identify EV-containing fractions.

Qualitative and Quantitative Analysis of Siderophore Production from Pseudomonas aeruginosa

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Cited by 2 •

2024

This protocol provides both qualitative and quantitative analyses of total siderophores, pyoverdine, and pyochelin from Pseudomonas aeruginosa.

Synthesis of Functionalized Magnetic Nanoparticles, Their Conjugation with the Siderophore Feroxamine and its Evaluation for Bacteria Detection

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2020

This work describes protocols for the preparation of magnetic nanoparticles, its coating with SiO2, followed by its amine functionalization with (3-aminopropyl)triethoxysilane (APTES) and its conjugation with deferoxamine using a succinyl moiety as a linker. A deep structural characterization description and a capture bacteria assay using Y. enterocolitica for all the intermediate nanoparticles and the final conjugate are also described in detail.

High-throughput Siderophore Screening from Environmental Samples: Plant Tissues, Bulk Soils, and Rhizosphere Soils

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Cited by 8 •

2019

We present a protocol for rapid screening of environmental samples for siderophore potential contributing to micronutrient bioavailability and turnover in terrestrial systems.

Vasodilation of Isolated Vessels and the Isolation of the Extracellular Matrix of Tight-skin Mice

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Cited by 1 •

2017

We describe the isolation of cardiac extracellular matrix from C57Bl/6J control mice, tight-skin mice, and tight-skin mice treated with the IRF5 inhibitory peptide. We also describe the vasodilation studies on the isolated vessels from C57Bl/6J, tight-skin mice and tight-skin mice treated with the IRF5 inhibitory peptide.

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