Peptidyl Arginase Deiminase

Peptidyl arginase deiminase, commonly called peptidylarginine deiminase (PAD), is an enzyme family that converts protein-bound arginine residues into citrulline, a post-translational modification important in immune regulation and inflammatory disease. In a calcium-dependent reaction, PAD binds target proteins and hydrolyzes the guanidino group of arginine, releasing ammonia and altering the protein’s charge, structure, and interactions. In immunology and infection, citrullination helps shape chromatin remodeling and neutrophil extracellular trap formation, while dysregulated PAD activity can influence inflammatory signaling, autoantigen generation, and host responses to microbes. PAD enzymes and their inhibitors are therefore studied as potential diagnostic and therapeutic targets.

Peptidyl Arginase Deiminase - Related Videos

Research

JoVE Journal - Biology
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Isolation of Translating Ribosomes Containing Peptidyl-tRNAs for Functional and Structural Analyses

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Cited by 2 •

2011

A major impediment to biochemical analyses of ribosomes containing nascent peptidyl-tRNAs has been the presence of other ribosomes in the same samples, ribosomes not involved in the translation of the specific mRNA sequence being analyzed. We developed a simple methodology to purify, exclusively, the ribosomes containing the nascent peptidyl-tRNA of interest.

Research

JoVE EoE - Immune Response

Induction and Visualization of Neutrophil Extracellular Traps in Pre-Labeled Neutrophils

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2025

This video demonstrates the induction and visualization of neutrophil extracellular traps or NETs in pre-labeled neutrophils using patient serum containing anti-neutrophil cytoplasmic antibodies. Furthermore, using an impermeable DNA dye and fluorescence microscopy enables the visualization of NETs.

Visualization of Extracellular Traps in Macrophages from Human Bronchoalveolar Lavage Fluids

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2025

This video demonstrates the immunolabeling of macrophage extracellular traps, METs, in bronchoalveolar macrophages from bronchoalveolar lavage fluid, and their visualization using a confocal microscope.

Education

JoVE Core - Molecular Biology

Termination of Translation

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2020

The large ribosomal subunit has several important structures essential to translation. These include the peptidyl transferase center (PTC) - which is the site where the peptide bond is formed - and a large, internal, water-filled tube through which the nascent polypeptide moves. This latter structure is called the Peptide Exit Tunnel, and it begins at the PTC and spans the body of the large ribosomal subunit. During translation, as the nascent polypeptide chain is synthesized, it passes through...

Depletion and Reconstitution of Macrophages in Mice

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Cited by 118 •

2012

Macrophages play a central role in homeostasis and pathology in many tissues. The protocol presented here describes methods for depleting macrophages in vivo, deriving polarized macrophages from bone marrow aspirates, and adoptively transferring macrophages into mice. These techniques allow determination of the role that polarized macrophages play in health and disease.

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