Fluorescent Cell Tracking

Fluorescent cell tracking is a set of methods for labeling and following living cells over time, allowing researchers to observe cell location, movement, survival, and interactions. Cells are tagged with fluorescent dyes or genetically encoded markers; when illuminated at an appropriate excitation wavelength, the fluorophore emits light at a longer wavelength that microscopy systems detect and record. In immunology and infection research, this approach can reveal how immune cells migrate toward infected tissues, interact with pathogens or infected cells, and contribute to inflammation or pathogen clearance. Quantitative time-lapse data can connect cellular behavior with disease progression and treatment responses, supporting studies of host-pathogen interactions and immune function.

Fluorescent Cell Tracking - Related Videos

Research

JoVE Journal - Biochemistry
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Tracking Single Proteins in Lipid Bilayers Using Fluorescence Microscopy

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2025

This article provides a detailed description of how to create samples for single-protein tracking in solid-supported lipid bilayers. It also explains a straightforward fluorescence microscope with single-molecule sensitivity and a fast frame rate. Finally, we outline the procedure for extracting single-protein trajectories.

Research

JoVE EoE - Bacterial Growth and Techniques

Microfluidic Patterning and Fluorescence-Based Tracking of Single-Cell Bacterial Growth

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2025

Source: Pioli, R., et al., Patterning of Microorganisms and Microparticles through Sequential Capillarity-assisted Assembly. J. Vis. Exp. (2021)This video demonstrates the method of capturing single fluorescently tagged Escherichia coli (E. coli) cells in microfluidic traps using a carbon-free suspension and controlled flow, followed by nutrient addition to trigger growth and fluorescence imaging of microcolonies.

A Luciferase-Fluorescent Reporter Influenza Virus to Track Viral Infections

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2025

This video demonstrates a method to track viral infections in mouse models using a recombinant luciferase and fluorescence protein-expressing bi-reporter Influenza A virus. This method enables both in vivo and ex vivo studies, enabling researchers to gain insights into viral dynamics and the effects of interventions.

In vivo Clonal Tracking of Hematopoietic Stem and Progenitor Cells Marked by Five Fluorescent Proteins using Confocal and Multiphoton Microscopy

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Cited by 11 •

2014

Combinatorial 5 fluorescent proteins marking of hematopoietic stem and progenitor cells allows in vivo clonal tracking via confocal and two-photon microscopy, providing insights into bone marrow hematopoietic architecture during regeneration. This method allows non-invasive fate mapping of spectrally-coded HSPCs-derived cells in intact tissues for extensive periods of time following transplantation.

Cell Tracking Using Photoconvertible Proteins During Zebrafish Development

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Cited by 17 •

2012

Here, we present a method for the photoactivated switch of photoconvertible fluorescent proteins (PCFPs) in the living zebrafish embryo and further tracking of photoconverted protein at specific time points during development. This methodology allows monitoring of cell biological events underlying different developmental processes in a live vertebrate organism.

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