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JoVE Journal
Neuroscience
Raccolta di regioni cerebrali del roditore congelato per analisi a valle
Raccolta di regioni cerebrali del roditore congelato per analisi a valle
JoVE Journal
Neuroscience
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JoVE Journal Neuroscience
Collection of Frozen Rodent Brain Regions for Downstream Analyses

Raccolta di regioni cerebrali del roditore congelato per analisi a valle

Full Text
22,411 Views
07:06 min
April 23, 2020

DOI: 10.3791/60474-v

Jim Wager-Miller1, Michelle Murphy Green1, Hana Shafique1, Ken Mackie1

1Department of Psychological and Brain Sciences, Gill Center for Biomolecular Research,Indiana University

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Please note that some of the translations on this page are AI generated. Click here for the English version.

Overview

This procedure details the process of collecting discrete frozen brain regions to obtain high-quality protein and RNA. Using adult CD-1 wild type mice, the method allows for the preservation of target molecules during dissection, ensuring meticulous sample collection for downstream applications.

Key Study Components

Area of Science

  • Neuroscience
  • Biological Sample Processing
  • Protein and RNA Extraction

Background

  • Preserving brain tissues is crucial for molecular analysis.
  • Common brain landmarks assist in identifying regions of interest.
  • Frozen dissection methods enhance the integrity of samples.
  • Stored samples can undergo various analyses while retaining quality.

Purpose of Study

  • To establish a reliable method for obtaining high-quality RNA and protein from specific brain regions.
  • To validate the effectiveness of frozen dissection techniques.
  • To facilitate molecular investigations in neuroscience.

Methods Used

  • Utilized frozen brain regions from adult CD-1 wild type mice.
  • Maintained tissue at low temperatures during dissection to preserve integrity.
  • Key steps included flash freezing, thawing, and precise blade placements for clean cuts.
  • Used RIPA buffer for protein extraction and a guanidinium solvent for RNA extraction.

Main Results

  • The method yielded high-quality RNA with strong ribosomal banding after analysis.
  • Both frozen dissection and fresh harvesting methods provided RNA with high integrity numbers.
  • Protein integrity was validated through Western blotting, showing distinct bands.
  • This approach maintains sample morphology for accurate future comparisons.

Conclusions

  • The procedure enables high-quality molecular analysis of dissected brain regions.
  • It supports various downstream applications, contributing to neuroscience research.
  • This methodology aids in understanding how substances like THC affect brain development.

Frequently Asked Questions

What are the advantages of using frozen dissection for brain samples?
Frozen dissection preserves the integrity of tissues, ensuring high-quality molecular data. It allows researchers to maintain the microenvironment of the samples, which is crucial for accurate study.
How are regions of interest identified in the dissection process?
Regions of interest are identified using common brain landmarks from the Allen Mouse Brain Atlas. Careful alignment of the brain within the matrix aids in accurate dissection.
What types of data can be obtained from this method?
Researchers can obtain high-quality RNA and proteins suitable for various analyses, including RT-qPCR, RNA-Seq, and Western blot assays. These enable a deeper understanding of molecular changes in the brain.
How can this method be adapted for different applications?
The frozen dissection method can be tailored by adjusting the types of solvents used for extraction or by modifying the freezing and dissection protocols to fit specific research needs.
What considerations should be taken into account when using this dissection technique?
Maintaining low temperatures throughout the process is critical to preserving sample quality. Care must be taken to handle tissues gently to avoid degradation during dissection.
What is the expected timeline for this dissection method?
The initial freezing of the brain takes about 60 seconds, followed by a 10-minute equilibration period before dissection can begin. Subsequent steps depend on the complexity of operation and desired outcomes.

Questa procedura descrive la raccolta di regioni cerebrali congelate discrete per ottenere proteine e RNA di alta qualità utilizzando strumenti economici e comunemente disponibili.

Questa procedura descrive la raccolta di regioni cerebrali congelate discrete per ottenere proteine e RNA di alta qualità utilizzando strumenti economici e comunemente disponibili. Poiché le regioni cerebrali sono tenute congelate dal raccolto attraverso la dissezione, le molecole bersaglio vengono preservate e il ricercatore ha il tempo di sezionare e immagazzinare attentamente le regioni di interesse. Identificare le regioni di interesse può essere inizialmente impegnativo.

L'uso di punti di riferimento cerebrali comuni man mano che emergono e si allontanano attraverso le sezioni in relazione alle regioni desiderate renderà chiara l'identificazione. Dopo aver rimosso il cervello dai topi adulti eutanasiati di tipo selvatico CD-1, flash congelare il tessuto per 60 secondi in azoto liquido o isopentane. Pre-raffreddare con ghiaccio secco e conservarlo a meno 80 gradi Celsius.

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