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Method Article

Thin Layer Chromatography-Based Separation of Mycolic Acid Variants: A Method to Separate Mycobacterial Cell Wall Lipids Based on Polarity

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July 8th, 2025

In This Article

Abstract

Source: Guallar-Garrido, S., et al. Analysis of the Lipid Composition of Mycobacteria by Thin Layer Chromatography. J. Vis. Exp. (2021).

This video demonstrates the thin-layer chromatography-based separation of mycolic acids. This technique separates the different mycolic acids—long-chain lipids present in the cell wall of mycobacteria—based on their polarity.

Protocol

All procedures involving animal models have been reviewed by the local institutional animal care committee and the JoVE veterinary review board.

1. Extraction of the total non-covalent-linked lipids from mycobacteria (Figure 1)

  1. Scratch 0.2 g of mycobacteria from a solid media and add to a glass tube with a polytetrafluoroethlene (PTFE) liner screw caps. Add a solution consisting of 5 mL of chloroform and 10 mL of methanol (chloroform:methanol, 1:2).
    NOTE: When organic solvents are used, only glass recipient should be used. No plastic containers are allowed. Moreover, PTFE liner screw caps for bottles are ....

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Results

Total lipid extraction process diagram: mycobacteria chloroform-methanol extraction, chromatography.
Figure 1: Scheme of the procedure of extracting lipid content of mycobacteria grown on solid media. Main steps to decipher lipids present on mycobacteria cells.

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
Acetic AcidMerck100063CAUTION. Anhydrous for analysis EMSURE® ACS,ISO,Reag. Ph Eur
AcetoneCarlo Erba400971NCAUTION. ACETONE RPE-ACS-ISO FOR ANALYS ml 1000
AnthroneMerck8014610010Anthrone for synthesis.
BenzeneCarlo Erba426113CAUTION. Benzene RPE - For analysis - ACS 2.5 l
Capillary glass tubeMerckBR708709BRAND® disposable BLAUBRAND® micropipettes, intraMark
ChloroformCarlo Erba412653CAUTION. Chloroform RS - For HPLC - Isocratic grade - Stabilized with ethanol 2.5 L
Dry block heaterJ.P. Selecta7471200
DicloromethaneCarlo Erba412622CAUTION. Dichloromethane RS - For HPLC - Isocratic grade - Stabilized with amylene 2.5 L
Diethyl etherCarlo Erba412672CAUTION. Diethyl ether RS - For HPLC - Isocratic grade - Not stabilized 2.5 L
Ethyl AcetatePanreac1313181211CAUTION. Ethyl acetate (Reag. USP, Ph. Eur.) for analysis, ACS, ISO
Ethyl Alcohol AbsoluteCarlo Erba4146072CAUTION. Ethanol absolute anhydrous RPE - For analysis - ACS - Reag. Ph.Eur. - Reag. USP 1 L
Glass funnelVidraFOCDURA.2133148 1217/1
Glass tubeVidraFOCVFOC.45066A-16125Glass tube with PTFE recovered cap
MethanolCarlo Erba412722CAUTION. Methanol RS - For HPLC - GOLD - Ultragradient grade 2.5 L
Molybdatophosphoric acid hydrateMerck51429-74-4CAUTION
Molybdenum Blue Spray Reagent, 1.3%SigmaM1942-100MLCAUTION
n-hexaneCarlo Erba446903CAUTION. n-Hexane 99% RS - ATRASOL - For traces analysis 2.5 L
n-nitroso-n-methylureaSigmaN4766CAUTION
Orbital shaking platformDDBiolab995018NB-205L benchtop shaking incubator
Petroleum ether (60-80ºC)Carlo Erba427003CAUTION. Petroleum ether 60 - 80°C RPE - For analysis 2.5 L
SprayerVidraFOC712/1
Sodium sulphate anhydrousMerck238597
Sulfuric acid 95-97%Merck1007311000CAUTION. Sulfuric acid 95-97%
TLC chamberMerckZ204226-1EARectangular TLC developing tanks, complete L × H × W 22 cm × 22 cm × 10 cm
TLC plateMerck1057210001TLC SilicaGel 60- 20x20 cm x 25 u
TLC Plate HeaterCAMAG223306CAMAG TLC Plat Heater III
TolueneCarlo Erba488551CAUTION. Toluene RPE - For analysis - ISO - ACS - Reag.Ph.Eur. - Reag.USP 1 L
VortexFisher Scientific10132562IKA Agitador IKA vórtex 3
1-naphtholSigma-Aldrich102269427CAUTION

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