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Method Article

Cell Aggregation Assay to Detect Trans Interactions between Cell Adhesion Molecules

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July 8th, 2025

In This Article

Abstract

Source: Restrepo, S., et al., Measuring Transcellular Interactions through Protein Aggregation in a Heterologous Cell System. J. Vis. Exp. (2020)

In this video, we demonstrate the technique to measure transcellular interactions between synaptic cell adhesion molecules through the HEK cell aggregation assay. In this assay, an equal number of HEK cells expressing a desired presynaptic cell adhesion molecule and a fluorescent protein are mixed with HEK cells expressing a post-synaptic cell adhesion molecule and another fluorescent protein. The interaction between the cell adhesion molecules forces the cells to aggregate, which can be measured by fluorescence microscopy.

Protocol

1. Cell culture and transfection

  1. Make HEK cell media with DMEM, 1x (Dulbecco's Modification of Eagle's Medium) supplemented with 4.5 g/L glucose, L-glutamine & sodium pyruvate, and 10% FBS. Sterile filter.
  2. Predetermine suitable ligands and receptors for aggregation assay.
    NOTE: Neurexin3α SS4+/- and one of its known ligands, LRRTM2, were used in this study. Ligands and receptors of interest were expressed from cDNAs in pcDNA3.1. A Gibson assembly was used to insert Neurexin3α into pcDNA3.1. Neurexin3α F/R:
    TTTAAACTTAAGCTTGGTACCGAGCTCGGATCCGCCACCATGAGCTTTACCCTCCACTC/
    GAGCGGCCGCCACTGTGCTGGATATCTG....

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
5 mL disposable microtubes with snap capsVWR89000-028Incubation of mixed population of HEK cells
1000 mL Rapid—Flow Filter Unit, 0.2 um aPES membraneThermo Fisher567-0020Sterilization of HEK media
15 mL SpectraTube centrifuge tubesWard’s Science470224-998Harvesting HEK cells
6-well sterile tissue culture platesVWR100062-892Culturing HEK cells
Calcium ChlorideSigma223506-500GCalcium phosphate transfection, HEK cell resuspension
Centrifuge - Sorvall Legend RTKendro Laboratory Products75004377Harvesting HEK cells
CO2 cell incubatorThermo ScientificHERACELL 150iIncubation of HEK cells during growth
DMEM, 1x (Dulbecco's Modification of Eagle's Medium) with 4.5 g/L glucose, L-glutamine & sodium pyruvateCorning10-013-CVHEK cell maintenance
Dulbecco’s Phosphate-Buffered Saline PBS (1X)Gibco14190-144Passaging/harvesting HEK cell
Ethylenediaminetetraacetic acidSigmaED-500GHarvesting HEK cells
Falcon Vented culture flasks, 75cm2 growth areaCorning9381M26Culturing HEK cells
Fetal Bovine SerumSigma17L184HEK cell maintenance
HEK293T cellsATCCModel system
ImageJNIHV: 2.0.0-rc-69/1.52pImage analysis
Magnesium Chloride hexahydrateSigmaM9272-500GHEK cell resuspension
Sodium phosphate dibasic anhydrousFisher BioReagentsBP332-500Calcium phosphate transfection
Tube rotatorIncubation of mixed population of HEK cells
UltraClear Microscope slides. White Frosted, Positive ChargedDenville Scientific Inc.M1021Image acquisition
Wide-field microscopeZeissAxio Vert 200MImage acquisition

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