Method Article

Diffuse Correlation Spectroscopy to Assess Cerebral Blood Flow in a Mouse Model

July 8th, 2025

In This Article

Abstract

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Source: Brothers, R. O., et al. Systems Analysis of the Neuroinflammatory and Hemodynamic Response to Traumatic Brain Injury. J. Vis. Exp. (2022)

In this video, we demonstrate the diffuse correlation spectroscopy technique to measure cerebral blood flow in a mouse model of mild traumatic brain injury.

Protocol

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All procedures involving animal models have been reviewed by the local institutional animal care committee and the JoVE veterinary review board

1. Assessment of cerebral blood flow with diffuse correlation spectroscopy

  1. DCS data acquisition
    1. Remove hair on the scalp. Because DCS works best in the absence of hair, it is necessary to remove fur on the head prior to the start of experiments. Typically, hair removal is done 1-3 days prior to the start of the study.
      1. Induce mice with 4.5% isoflurane in 100% oxygen for 45 seconds and maintain with 1-2% isoflurane in 100% oxygen.
      2. Shave the head between the eyes and the ears. Then, use depilatory cream to remove fur on the head as in Figure 1.
      3. Allow the animal to recover from anesthesia on a warming pad and then return to the cage.
    2. Measure cerebral blood flow with DCS. To minimize motion artifacts during measurement, study mice under brief isoflurane anesthesia.
      NOTE: Visually monitor respiration and toe pinch response throughout measurements and adjust isoflurane concentration as needed to ensure consistent depth of anesthesia. Significant variations in the depth of anesthesia could alter blood flow given the known vasomodulatory effects of isoflurane.
      1. Induce with 4.5% isoflurane in 100% oxygen for 45 seconds, and then maintain with 1.0-1.75% isoflurane in 100% oxygen. Confirm sufficient depth of anesthesia by the absence of a toe pinch response and normal respiration (between ~60-80 breaths per minute).
      2. After a 2 min period of stabilization, gently rest the DCS sensor over the right hemisphere such that the top edge of the optical sensor lines up with the back of the eye and the side of the sensor lines up along the midline (Figure 1). Cup a hand over the sensor to shield it from room light. Acquire 5 seconds of data (1 Hz acquisition).
      3. Reposition the sensor over the left hemisphere, and acquire 5 seconds of data.
      4. Repeat 3 times/hemisphere to account for local heterogeneities under the tissue surface.
    3. Recovery
      1. Remove the mouse from anesthesia and place it on a warming pad.
      2. After the mouse regains its righting reflex return it to the cage.

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Results

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Optical sensor and anesthesia setup; mouse imaging, source-detector pattern; diagram.
Figure 1: Measurement of cerebral blood flow by Diffuse Correlation Spectroscopy. (A) An optical sensor is gently manually held over the right hemisphere to measure blood flow in an anesthetized mouse. (B) Representative sensor placement on the right ...

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Disclosures

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No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
Depilatory creamAmazonNair
DiH<sub>2</sub>OVWRVWRL0200-1000
Hardware Autocorrelator Boardwww.correlator.comFlex05-8ch
Isoflurane 250 mLMED-VET INTERNATIONALRXISO-250
Kimwipe (11.2 x 21.3 cm)VWR21905-026
Laboratory vortex mixerVWR10153-838
LabViewNational InstrumentsLabVIEW
Luminex 200, HTS, FLEXMAP 3D, or MAGPIX with xPONENT softwareLuminex Corporation
R Programming Language
RStudiowww.rstudio.com
Sonicator
1 m acrylic guide tubeMcMaster-Carr49035K85
4 photon counting avalanche photodiodePerkin-ElmerSPCM-AQ4C-IO
400 um multimode source fiberThorlabs Inc.FT-400-EMT
54 g boltAce Hardware0.95 cm basic body diameter, 2 cm head diameter, 10.2 cm length
780 nm single mode detector fiberThorlabs Inc.780HP
852 nm long-coherence length laserTOPTICA PhotonicsiBeam smart

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Tags

Traumatic Brain InjuryNear Infrared LightAvalanche PhotodiodeAutocorrelatorCerebral Blood Flow IndexOptical Sensor PlacementData Acquisition

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