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Method Article

Analyzing the Prey-Evoked Neuronal Activity in a Transgenic Zebrafish Larva

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July 8th, 2025

In This Article

Abstract

Source: Muto, A. et al., Ablation of a Neuronal Population Using a Two-photon Laser and Its Assessment Using Calcium Imaging and Behavioral Recording in Zebrafish Larvae. J. Vis. Exp. (2018)

This video demonstrates the method for studying visual prey detection in transgenic zebrafish larvae using calcium indicator-based fluoresce imaging with their neurons expressing fluorescent calcium indicator complexes.

Protocol

1. Ablation of a Subpopulation of Neurons Using a Two-photon Laser Microscope

NOTE: If users plan on performing Ca imaging following ablation, use the UAShspzGCaMP6s line. If users plan on performing behavioral recording following ablation, use the UAS:EGFP line, as the ablation of EGFP-positive cells is easier to perform than of GCaMP6s-expressing cells.

  1. Begin by setting up the mating of a Gal4 line that labels specific neurons to be studied and UAS:EGFP or UAShspzGCaMP6s. Be sure to use the nacre background for both parents so that nacre homozygotes can be obtained.

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Results

Fish embryo microscopy, surgical tool, software interface for data analysis in biological research.
Figure 1. Zebrafish larvae. (A) Five-day old (5-day post-fertilization (5-dpf)) zebrafish larva and its prey, a paramecium. (B) 4-dpf nacre larva embedded in 2% low melting-point agarose. Note that the nacre strain lacks black pigments o.......

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
NuSieve GTG AgaroseLonzaCat.#50080low-melting temperature agarose
6 cm petri dishFALCONProduct#:351007
dissecting needleAS ONE CorporationCat. No. 2-013-01https://keystone-lab.com/en/item/detail/404142
LSM7MPCarl Zeisstwo-photon laser scanning microscope
W Plan-Apochromat 63x/1.0Carl Zeiss63X objective lens
Imager.Z1Carl Zeissan epi-fluorescence microscope
ZENCarl ZeissImage acquisition software for confocal microscopes
Secure-Seal Hybridization Chamber Gasket, 8 chambers, 9 mm diameter x 0.8 mm depthMolecular ProbesCatalogue # S-24732Used as a recording chamber in Ca imaging
Surgical knifeMANIOphthalmic knife MST15
ORCA-Flash4.0Hamamatsu Photonicsmodel:C11440-22CUA scientific CMOS camera
HCImageHamamatsu PhotonicsImage acuisition software
Hard Disk Recording moduleHamamatsu PhotonicsAn software module that enables saving the movie files onto a hard disc drive in a short time
Point Grey Grasshopper3 4.1 MP Mono USB3 VisioFLIR Systems, Inc.Product No. GS3-U3-41C6NIR-CCMOS camera
XIMEA xiQ cameraXIMEAProduct No. MQ042RG-CMCMOS camera
A ring LED lightCCSModel: LDR2-100SW2-LAWhite LED
Nylon mesh 32µmTokyo ScreenN-No.380Thttp://www.tokyo-screen.com/cms/sta20347/
Nylon mesh 13µmTokyo ScreenN-No. 508T-Khttp://www.tokyo-screen.com/cms/sta20347/
Metal seive 150 micron apertureTokyo Screenhttp://www.tokyo-screen.com/cms/sta20341/#ami
Metal seive 75 micron apertureTokyo Screenhttp://www.tokyo-screen.com/cms/sta20341/#ami
EBIOSAsahi Food & Healthcare, Co. Ltd.Dry beer yeast
LabVIEWNational InstrumentsAn integrated development environment for programming
Mai-Tai HPSpectra PhysicsTwo-photon laser

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