George Streisinger pioneered the use of Danio rerio, commonly known as zebrafish, as a model system for the genetic analysis of vertebrate development10. The model offers several advantages including: (1) relatively simple and inexpensive animal husbandry; (2) external fertilization, allowing easy access to embryos from the earliest developmental stages; and (3) a transparent embryo, permitting direct and repeated observations of cells, tissues, and organs as they form.
Over the ensuing decades, several advances further increased the power of the zebrafish model. In particular, forward genetic screens and whole-genome sequencing efforts played key roles in the identification of mutations and genes critical to many developmental processes11,12,13,14,15,16. Gateway cloning methods have allowed the routine application of transgenic approaches17,18. Recent advances in genome editing, exemplified by transcription activator-like (TALENs) and clustered regularly interspaced short palindromic repeats (CRISPR)-Cas9 nucleases, allow for the targeted introduction of mutations, as well as knock-out and knock-in approaches19,20,21,22. Combined, these methods make zebrafish a powerful model for the study of the genetic mechanisms underlying specific behaviors and several human diseases23,24,25,26,27.
This work focuses on developmental regulation and the role of electrical activity in neuronal development. The focus is on the spinal cord, for which the zebrafish model provides several advantages. First, it is relatively easy to access zebrafish at embryonic and larval stages; therefore, one can study spinal cord function during developmental stages that have fewer neurons and simpler circuitry28,29. Moreover, the zebrafish spinal cord has a diverse set of neurons, similar to other vertebrates, as demonstrated by characteristic and distinguishing patterns of transcription factors30,31,32,33,34,35.
The majority of studies in zebrafish that aim to uncover the mechanisms that underlie the function of spinal cord circuits, especially ones that support locomotion, are understandably focused on larval stages36,37,38,39,40,41,42,43. However, many of the neurons that form the spinal locomotive networks initiate their differentiation at early embryonic stages, ~9-10 h post-fertilization (hpf)44,45,46,47,48,49,50,51. In view of this, understanding how the morphological and electrical properties of spinal neurons arise and change between the embryonic and larval stages is important for an overall understanding of locomotor circuit formation and function.
The dissection methods described here allow patch clamp recordings from spinal neurons and have been successfully applied at embryonic stages (~17-48 hpf) and larval stages (~3-7 days post fertilization [dpf]). This approach limits the amount of dissection required to provide access to the neurons of interest. The protocol differs from the majority of the other published methods for recording from zebrafish spinal neurons in that veterinarian suture glue is used, rather than a fine tungsten pin, to attach the embryo or larva to the recording chamber. The availability of two different approaches (i.e., suture glue versus the tungsten pin) for mounting the zebrafish embryos or larvae for electrophysiological analysis provides researchers with alternative options to achieve their specific experimental goals.
First, procedures for accessing and recording from a population of primary sensory neurons, Rohon-Beard cells, are described. The cell bodies of these neurons lie within the dorsal spinal cord. Rohon-Beard cells exist in numerous vertebrate species, differentiate early in development, and underlie the embryonic touch response6,44,47,48.
Second, procedures for accessing and recording from spinal motor neurons are detailed. Zebrafish spinal motor neurons arise during two waves of neurogenesis. The earlier-born primary motor neurons arise at the end of gastrulation (~9-16 hpf), with only 3-4 primary motor neurons present per hemisegment45,46,49. In contrast, the later-born population of secondary motor neurons is more numerous and arises during a prolonged period, starting at ~14 hpf45,50. Secondary motor neuron genesis in mid-trunk segments is mostly completed by 51 hpf50. Secondary motor neurons are considered to be the counterpart of motor neurons in amniotes46. Interestingly, supraspinal neurons, via dopamine, regulate locomotion in the larva and secondary motor neuron genesis in the embryo and young larva50,51. Primary and secondary motor neurons each comprise several different subtypes. Each primary motor neuron subtype projects a peripheral axon that innervates a characteristic muscle group, resulting in a stereotypical, identifying axonal trajectory. Generally, secondary motor neurons follow the axonal pathways previously established by primary motor neurons. Thus, with respect to axonal trajectories, primary and secondary motor neurons are similar, with the exception that axonal thickness and somata size are greater for primary motor neurons45.
Third, methods for recording from a few types of interneurons are discussed. However, in these cases, a limited amount of removal of other spinal cord cells is required, and thus the spinal cord is less intact than for recordings from Rohon-Beard cells or motor neurons.