Here, we show the process of creating a cellular electric voltage reporter zebrafish line to visualize embryonic development, movement, and fish tumor cells in vivo.
Method Article
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| Name | Company | Catalog Number | Comments |
|---|---|---|---|
| 14mL cell culture tubes | VWR | 60818-725 | E.Coli culture |
| Agarose electrophoresis tank | Thermo Scientific | Owl B2 | DNA eletrophoresis |
| Agarose RA | Amresco | N605-500G | For making the injection gels |
| Attb1-ASAP1-F primer | IDT DNA | GGGGACAAGTTTGTACAAAAAA GCAGGCTTCACCATGGAGACGA CTGTGAGGTATGAACA | ASAP1 coding region amplification for subcloning |
| Attb2-ASAP1-R primer | IDT DNA | GGGGACCACTTTGTACAAGAAA GCTGGGTCTTAGGTTACCACTTC AAGTTGTTTCTTCTGTGAAGCCA | ASAP1 coding region amplification for subcloning |
| Bright field dissection scope | Nikon | SMZ 745 | Dechorionation, microinjection, mounting |
| Color camera | Zeiss | AxioCam MRc | Fish embryo image recording |
| Concave slide | VWR | 48336-001 | For holding fish embryos during imaging process |
| Disposable transfer pipette 3.4 ml | Thermo Scientific | 13-711-9AM | Fish embryos and water transfer |
| Endonuclease enzyme, Not I | NEB | R0189L | For linearizing plasmid DNA |
| Epifuorescent compound scope | Zeiss | Axio Imager.A2 | Fish embryo imaging |
| Epifuorescent stereo dissection scope | Zeiss | Stereo Discovery.V12 | Fish embryo imaging |
| Fluorescent light source | Lumen dynamics | X-cite seris 120 | Light source for fluorescence microscopes |
| Forceps #5 | WPI | 500342 | Dechorionation and needle breaking |
| Gateway BP Clonase II Enzyme mix | Thermo Scientific | 11789020 | Gateway BP recombination cloning |
| Gateway LR Clonase II Plus enzyme | Thermo Scientific | 12538120 | Gateway LR recombination cloning |
| Gel DNA Recovery Kit | Zymo Research | D4002 | DNA gel purification |
| Loading tip | Eppendorf | 930001007 | For loading injection solution into capilary needles |
| Methylcellulose (1600cPs) | Alfa Aesar | 43146 | Fish embryo mounting |
| Methylene blue | Sigma-Aldrich | M9140 | Suppresses fungal outbreaks in Petri dishes |
| Microinjection mold | Adaptive Science Tools | TU-1 | To prepare agaorse mold tray for holding fish embryos during injection |
| Microinjector | WPI | Pneumatic Picopump PV820 | Microinjection injector |
| Micro-manipulator | WPI | Microinjector MM3301R | Microinjection operation |
| Micropipette puller | Sutter instrument | P-1000 | For preparing capillary needle |
| Mineral oil | Amresco | J217-500ml | For calibrating injection volume |
| mMESSAGE mMACHINE SP6 Transcription Kit | Thermo Scientific | AM1340 | mRNA in vitro transcription |
| Monocolor camera | Zeiss | AxioCam MRm | Fish embryo image recording |
| Plasmid Miniprep Kit | Zymo Research | D4020 | Prepare small amount of plasmid DNA |
| Plastic Petri dishes | VWR | 25384-088 | For holding fish or fish embryos during imaging process |
| RNA Clean & Concentrator-5 | Zymo Research | R1015 | mRNA cleaning after in vitro transcription |
| Spectrophotometer | Thermo Scientific | NanoDrop 2000 | For measuring DNA and RNA concentrations |
| Stage Micrometer | Am Scope | MR100 | Microinjection volume calibration |
| Thermocycler | Bio-Rad | T100 | DNA amplification for gene cloning |
| Thin wall glass capillaries | WPI | TW100F-4 | Raw glass for making cappilary needle |
| Tol2-exL1 primer | IDT DNA | GCACAACACCAGAAATGCCCTC | Tol2 excise assay |
| Tol2-exR primer | IDT DNA | ACCCTCACTAAAGGGAACAAAAG | Tol2 excise assay |
| TOP10 Chemically Competent E. coli | Thermo Scientific | C404006 | Used for transformation during gene cloning |
| Tricaine mesylate | Sigma-Aldrich | A5040 | For anesthetizing fish or fish embryos |
| UV trans-illuminator 302nm | UVP | M-20V | DNA visualization |
| Water bath | Thermo Scientific | 2853 | For transformation process of gene cloning |
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