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Research Article
Erratum Notice
Important: There has been an erratum issued for this article. View Erratum Notice
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The article Assisted Selection of Biomarkers by Linear Discriminant Analysis Effect Size (LEfSe) in Microbiome Data (10.3791/61715) has been retracted by the journal upon the authors' request due to a conflict regarding the data and methodology. View Retraction Notice
This study presents a protocol for establishing a reproducible, minimally invasive rat model of superior sagittal sinus thrombosis induced by ferric chloride, utilizing a silk-suture method in combination with laser speckle contrast imaging and high-resolution ultrasound for evaluation.
Cerebral venous thrombosis (CVT) is a rare but potentially life-threatening neurological disorder. Animal models offer critical platforms for investigating their pathophysiology and evaluating potential therapies. In this study, we present a modified rat model of superior sagittal sinus (SSS) thrombosis using a FeCl₃-soaked suture technique. Male Sprague-Dawley rats (220-250 g) underwent a paramedian scalp incision and creation of a 1 cm cranial bone window over the SSS. Compared to the traditional midline incision, this approach prevents adhesion among the incised skin, the bone window, and the underlying dura mater. Additionally, it avoids the interference caused by suture knots located over the SSS, thereby improving the quality of ultrasound imaging. A 2-0 silk suture soaked in 40% FeCl3 was applied directly onto the exposed sinus for two consecutive 5-min intervals. Compared to the traditional FeCl3-filter paper method, this technique minimizes direct chemical injury to the parasagittal cortex. Laser speckle contrast imaging was employed to assess cerebral venous perfusion before and after FeCl3 application. A significant reduction in blood flow confirmed successful thrombosis. Seven days post-surgery, thrombus formation and hemodynamic changes were evaluated via high-resolution ultrasound and analyzed using Vevo LAB software, which provided volumetric and hemodynamic data of the thrombus. This modified model offers a reproducible, minimally invasive, and imaging-compatible approach for preclinical CVT research.
Cerebral venous thrombosis (CVT) is a special type of cerebrovascular disease, accounting for 0.5-3% of all strokes and serving as an important cause of stroke in young adults1. The core pathological change of this disease is thrombosis within the dural venous sinuses and/or cerebral veins, which leads to impaired cerebral venous drainage, subsequently causing increased intracranial pressure, cerebral edema, venous infarction, or hemorrhage2. To better elucidate its underlying mechanisms and evaluate novel therapeutic interventions, reliable and reproducible animal models are indispensable. Given that the superior sagittal sinus (SSS) is the most frequently affected site and its superficial location facilitates operational procedures2,3, current animal experiments primarily utilize the superior sagittal sinus thrombosis (SSST) model.
Among various modeling methods, the ferric chloride (FeCl3) induction method has become one of the most widely used techniques due to its operational simplicity and cost-effectiveness4. In this model, the topical application of a FeCl3 solution directly damages the venous sinus endothelium, exposing the subendothelial matrix through its strong oxidative properties. This exposure activates platelet aggregation and the coagulation cascade, ultimately inducing venous sinus thrombosis5. However, compared with other methods, the traditional FeCl3-filter paper model also has several drawbacks. The most critical issue is that the paramagnetic properties and high magnetic susceptibility of FeCl3 generate substantial artifacts during magnetic resonance imaging, severely compromising the accuracy of thrombus assessment and venous sinus recanalization observation6. Furthermore, the shape of the filter paper does not fit well with the SSS, making it prone to injuring the brain parenchyma surrounding the sinus. Therefore, it is difficult to determine whether the parenchymal damage around the SSS results from the thrombosis itself or from direct chemical injury caused by FeCl3.
The overall goal of the present work is to establish a modified FeCl3-induced SSST rat model that reduces direct cortical injury caused by FeCl3 and allows for the assessment of blood flow and thrombus size within the SSS. This study introduces a paramedian approach combined with a FeCl3-soaked suture technique, which minimizes direct cortical chemical injury caused by FeCl3, and enables real-time, noninvasive, and quantitative monitoring of venous sinus blood flow and thrombus formation using high-resolution ultrasound.
This protocol has been approved by the Animal Experiments and Experimental Animal Welfare Committee of Capital Medical University with Approval No. AEEI-2025-138. The reagents and the equipment used are listed in the Table of Materials.
1. Establishment of a modified FeCl3-induced rat SSST model
2. Assessment of successful model establishment
NOTE: During the surgical procedure, LSCI was used to measure the venous blood flow in the SSS after creating the cranial window and before FeCl3 application, and again after FeCl3 application and rinsing of the surgical field, but prior to skin closure. The model is considered successfully established when the venous blood flow in the SSS shows a significant decrease.
3. Assessment of thrombus area/volume and hemodynamic changes
NOTE: Several days to several weeks after the procedure, use high-resolution ultrasound to evaluate thrombus changes and vascular recanalization.
The schematic diagram of the modified FeCl3-induced SSST model is shown in Figure 1. Experimental results demonstrated that after application of the FeCl3-saturated silk suture to the SSS, LSCI detected a significant reduction in local blood flow, indicating successful occlusion of the venous sinus and confirming the sensitivity of LSCI for detecting dynamic perfusion changes (Figure 2). On postoperative day 7, small-animal ultrasound confirmed the formation of a thrombus in the SSS with partial luminal recanalization (Figure 3). The Vevo LAB software was used to analyze ultrasound images, obtaining cross-sectional areas (in sagittal and coronal planes) and the volume of the thrombus, as well as blood flow velocity in the residual lumen (Figure 3 and Figure 4).
These results collectively demonstrate the capability of the combined FeCl3-soaked suture and imaging approach to reliably establish, monitor, and quantify SSS thrombosis in vivo. LSCI enables the real-time assessment of venous perfusion immediately following FeCl3 exposure, whereas high-resolution ultrasound allows for the longitudinal evaluation of thrombus morphology and hemodynamic alterations without the need for invasive sampling. This multimodal strategy provides a comprehensive characterization of both the acute occlusive process and the subsequent hemodynamic recovery.

Figure 1: Schematic diagram of the modified FeCl3-induced SSST model. (A) Paramedian incision (black arrow). (B) Skull drilling area (red line). (C) 2-0 silk suture saturated with FeCl3 solution (black line). Please click here to view a larger version of this figure.

Figure 2: Blood flow in the SSS before and after local application of FeCl3. Black arrows indicate the SSS. In the pseudocolor pattern, red/yellow represents high perfusion areas, while blue/green indicates low perfusion regions. Please click here to view a larger version of this figure.

Figure 3: Thrombus formation in the SSS with partial recanalization. (A) Maximum sagittal cross-sectional area (B-mode). (B) Maximum coronal cross-sectional area (B-mode). (C) Maximum blood flow velocity (PW Doppler mode). Red, blue, and yellow arrows indicate thrombus, residual lumen, and blood flow, respectively. Please click here to view a larger version of this figure.

Figure 4: Three-dimensional volume measurement of the SSST. Image acquisition slice thickness: 0.04 mm. Please click here to view a larger version of this figure.
CVT is an uncommon but potentially life-threatening specific type of cerebrovascular disease1. To further investigate its pathological mechanisms and develop effective intervention strategies, researchers have established various animal models of SSST, primarily including SSS ligation or occlusion7,8,9, prothrombotic substance injection10, autologous blood clot injection11, photochemical induction12, and FeCl₃ induction4. Among these, the SSS ligation or occlusion model cannot simulate the spontaneous dissolution process of thrombi, making it unsuitable for therapeutic efficacy evaluation13; Prothrombotic substance injection carries the risk of drug diffusion into the systemic circulation, potentially causing non-target site thrombosis8; Although autologous blood clot injection achieves embolism, it does not involve core pathological mechanisms of venous thrombosis such as vascular endothelial injury, hemodynamic abnormalities, and hypercoagulability11; Photochemical induction is more suitable for small vessel thrombosis modeling, as the high blood flow velocity in the SSS affects its thrombus induction efficacy4.
In 2005, Röttger et al. first established the FeCl₃-induced SSST model in rats4. This model successfully induced thrombus formation by applying filter paper strips saturated with 40% FeCl₃ solution to the surface of the SSS for 4 min, and observed the spontaneous dissolution of thrombi4. Subsequent studies have mostly adjusted the concentration of FeCl₃ (ranging from 10% to 40%) or the exposure duration (from 5-15 min) based on this foundation6,14,15. We made the following improvements to this model: First, the traditional midline incision was modified to a paramedian incision, which effectively prevents postoperative adhesion among the skin, bone window, and dura mater, while eliminating interference from suture knots above the SSS on imaging signals, thereby significantly improving the quality of ultrasound imaging. Second, a smaller-diameter 2-0 silk suture was used to replace the filter paper strips, minimizing the extent of chemical damage to the cortical tissue adjacent to the sinus. In addition, LSCI was employed to compare changes in local blood flow in the SSS before and after FeCl₃ application, in order to assess whether the model was successfully established. With advantages including non-invasiveness, operational simplicity, and real-time imaging, LSCI has been widely applied in dynamic CBF monitoring for various stroke models, including SSST16. Most importantly, we innovatively used the small-animal ultrasound imaging system to perform 3D scanning of the SSS, enabling direct observation of the thrombi. Current researches predominantly rely on magnetic resonance venography or digital subtraction angiography to evaluate luminal recanalization3,17. However, these techniques can only indirectly infer the presence of thrombi or vascular recanalization through changes in blood flow signals. In contrast, ultrasound technology enables the direct visualization of thrombi and allows for the precise quantification of their cross-sectional area, volume, and intraluminal blood flow velocity, thereby providing a more comprehensive and objective basis for evaluating the efficacy of different treatment approaches in thrombus dissolution.
In summary, by integrating with LSCI and high-resolution ultrasound imaging technologies, the modified FeCl₃-induced SSST model described in this study provides a more reliable and intuitive experimental platform for the development and efficacy evaluation of treatment measures. However, several limitations should be acknowledged. First, the model does not permit direct observation of thrombosis or changes in blood flow in the bridging veins adjacent to the superior sagittal sinus. Second, FeCl₃ induces endothelial injury through strong oxidative stress, which might not fully mimic the complex pathophysiological processes of spontaneous CVT in humans. Third, this model primarily reflects the acute and subacute phase of thrombosis, while the chronic remodeling processes are not well represented.
Future studies may extend this method to explore venous remodeling and neurovascular recovery following CVT, or to evaluate the efficacy of novel thrombolytic and neuroprotective agents under longitudinal imaging guidance. The integration of additional modalities, such as photoacoustic imaging or molecular contrast-enhanced ultrasound, could further enable visualization of thrombus composition, inflammation, and neovascularization. Moreover, adapting this minimally invasive approach to larger animal models may facilitate translational research and preclinical testing of endovascular or pharmacological interventions for cerebral venous thrombosis.
The authors have no conflicts of interest to declare.
This work was supported by the National Natural Science Foundation of China (82401527).
| 1 mL Syringe | Shenzhen Huayon Biotechnology Co., Ltd. | 21-3020 | |
| 2-0 silk sutures | Shanghai Pudong Jinhuan Medical Products Co.,Ltd | A224 | |
| 3D-acquisition motor | Fujifilm VisualSonics | https://www.visualsonics.com/gallery/extended-3d-motor | |
| 4-0 silk sutures | Shanghai Pudong Jinhuan Medical Products Co.,Ltd | A222 | |
| 5% povidone-iodine | Shandong Lircon Medical Technology Co., Ltd. | https://www.lircon.cn/products_details/100.html | |
| 5 mL Syringe | Shenzhen Huayon Biotechnology Co., Ltd. | 21-3023 | |
| Disposable razor blade | Dongyang Jinmin Trading Co., Ltd. | ST300 | |
| FeCl3 | Macklin | I811935 | |
| Heating pad | Shenzhen Huayon Biotechnology Co., Ltd. | 36-0001 | |
| Isoflurane | RWD Life Science | R510-22-10 | |
| Laser speckle imaging system | RWD Life Science | RFLSI III | |
| Linear array transducer | Fujifilm VisualSonics | UHF57x | |
| Medical tape | Suzhou Konlida Medical Supplies Co., Ltd. | B02 | |
| Micro handheld cranial drill | RWD Life Science | 78001 | |
| Needle holder | RWD Life Science | F31025-13 | |
| Normal saline | Shanghai Beyotime Biotechnology Co., Ltd. | ST341-500ml | |
| Ophthalmic ointment | Shenzhen Huayon Biotechnology Co., Ltd. | 19-7223 | |
| Reverse-cutting needles | Shanghai Pudong Jinhuan Medical Products Co.,Ltd | TJ-3-514 | |
| Rodent operating platform | Shanghai Yuyan Scientific Instrument Co., Ltd. | 30150 | |
| Scalpel blade | RWD Life Science | S31015-01 | |
| Scalpel handle | RWD Life Science | S32003-12 | |
| Small animal anesthesia machine | RWD Life Science | R500 | |
| Small animal ultrasound and photoacoustic imaging system | Fujifilm VisualSonics | Vevo F2 | |
| Smooth Forceps | RWD Life Science | F12013-10 | |
| Sodium Pentobarbital | Sigma-Aldrich (Shanghai) Trading Co., Ltd. | P3761 | |
| Surgical Scissors | RWD Life Science | S14014-10 | |
| Toothed Forceps | RWD Life Science | F12011-13 | |
| Ultrasound gel | Shandong Lircon Medical Technology Co., Ltd. | https://www.lircon.cn/products_details/230.html |