This protocol establishes a behavioral phenotyping paradigm in MPTP-treated zebrafish larvae to evaluate Parkinson's disease-like motor and non-motor deficits.
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Method Article
This protocol establishes a behavioral phenotyping paradigm in MPTP-treated zebrafish larvae to evaluate Parkinson's disease-like motor and non-motor deficits.
This article introduces a unique, multiparametric behavioral phenotyping protocol for MPTP-induced Parkinson's disease (PD) in larval zebrafish. Chemical induction of PD-like pathology in zebrafish provides a high-throughput, genetically tractable system, yet most studies have focused narrowly on basic locomotor assays or simple light-dark transitions. Such limited approaches fail to capture the broader spectrum of PD-related dysfunctions, ranging from bradykinesia and sensorimotor deficits to anxiety-like behaviors and sleep disturbances. To address this gap, this study developed an integrated battery of 6 complementary assays: locomotor test to assess general locomotor and exploratory drive; thigmotaxis assessment to detect anxiety-related edge-preference behaviors; startle response test to record bradykinesia and impaired motor reactivity; light-dark challenge assays to evaluate risk-taking and stress responsiveness; photomotor response paradigms (including strobe light stimulation) to quantify sensorimotor and reflexive movement; and sleep-wake regulation monitoring to measure sleep-wake behavior. Larval zebrafish are exposed to sublethal concentrations of MPTP from 1 day post-fertilization (dpf) to 5 dpf, with behavioral assessments initiated from 4 to 6 dpf. High-resolution automated tracking generates several behavioral endpoints per assay. This approach uncovers previously undetected PD-like alterations, such as disorderly sleep architecture, impaired habituation learning, sensorimotor and reflexive movement, reflecting early nonmotor symptoms. By combining these assays, researchers obtain a comprehensive behavioral symptom that more closely mirrors the complexity of human PD. This protocol expands the paradigm for studying PD pathogenesis, screening candidate therapeutics, and exploring environmental modulators. It exemplifies the collection's goal of presenting innovative animal models that enhance translational relevance through robust, multifaceted phenotyping.
Parkinson's disease (PD) is the second most prevalent neurodegenerative disorder after Alzheimer's disease1. Its prevalence and the number of individuals affected have been steadily increasing in recent years, presenting a significant public health challenge worldwide2. The incidence rate of PD notably escalates with age3,4. Clinically, PD manifests through both motor symptoms -- such as dyskinesia, bradykinesia, resting tremor, and postural instability -- and a variety of non-motor symptoms, including cognitive impairment, anxiety, and sleep disturbances5. Currently, the diagnosis of PD primarily depends on the presence of motor symptoms6; however, by the time these symptoms become evident, over 60% of the dopamine neurons in the substantia nigra have already been lost7. Although non-motor symptoms frequently appear earlier, the absence of specific and objective assessment criteria complicates early diagnosis and intervention8. Presently, the primary treatment for PD involves the administration of levodopa9, which is converted into dopamine in the brain, thereby replenishing dopamine levels in the striatum. While this treatment can temporarily alleviate symptoms, it does not halt the progression of the disease10. Consequently, further research into the pathogenesis of PD and drug screening is essential.
Building appropriate animal models is crucial for the research on the pathogenesis of PD and anti-PD drug screening. Now, there are three main models for PD studies: chemical induction model11, gene editing model12, and human xenotransplantation model13. Commonly used model animals include rodents, such as mice14, and non-human primates like monkeys15. Recently, zebrafish (Danio rerio) have gained increasing attention in PD studies for their advantages such as small size, rapid growth, high genetic homology with humans, and transparent embryos16. Using neurotoxin MPTP (1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine) to induce dopamine neuron damage17,18, is a classical method to construct a PD model. Zebrafish exposed to sublethal MPTP concentrations exhibit various PD-like behavioral phenotypes19.
However, most zebrafish PD studies nowadays mainly concentrate on basic locomotor behaviors or simple light-dark transitions16,20, and single-dimensional behavioral assays are difficult to fully reflect the complex behavioral characteristics of PD, especially the behavioral changes in non-motor function. Considering PD is a disease that involves multiple neurobehavioral systems beyond motor control21,22,23, a multiparametric behavioral phenotype evaluation method is urgently needed to capture its multisystem phenotypes24.
Accordingly, this study builds a multiple, parametric, and rapid behavioral phenotyping assay protocol to more comprehensively describe the PD-like behavioral phenotypes in MPTP-treated zebrafish larvae. A sublethal dose of MPTP (50 µM)25 was applied to larvae from 1 to 5 days post-fertilization (dpf)16,20,26. From 4 to 6 dpf16,20,24, we conducted 6 behavioral tests: sleep-wake regulation monitoring, photomotor response paradigms, thigmotaxis assessment, locomotor assessment, startle response test, and light-dark challenge assays. These behavioral assessments cover both motor and non-motor aspects, such as movement deficits, sensorimotor, habituation learning, risk-taking, stress responsiveness, and sleep-wake rhythm.
Utilizing the Zebrabox high-throughput video tracking system and quantitative analysis method, we extracted and quantified various behavioral parameters and compared the behavioral differences between the MPTP-treated group and the wild-type (WT) group by statistics. Compared with existing zebrafish PD assays, this multiparametric behavioral battery captures motor and non-motor phenotypes within a standardized framework. The automated tracking system ensures objective behavioral data acquisition and high reproducibility. In addition, the small body size of larvae allows individual animals to be placed in multi-well plates, enabling high-throughput assessment. The above advantages are beneficial for deeply analyzing the pathological mechanism of PD, screening the candidate drugs or compounds, and exploring the influence of environmental factors on the occurrence or development of PD.
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This study involving zebrafish was conducted in compliance with institutional guidelines for animal care and use, and was approved by the Ethical Committee of the School of Pharmaceutical Sciences, Shandong University (No.YXDW2025-0056). The reagents and the equipment used are listed in the Table of Materials.
1. MPTP Preparation
2. Zebrafish embryos preparation and grouping
3. Sleep - wake regulation monitoring
4. Photomotor response paradigms
NOTE: Photomotor response paradigms (including strobe light) are high-throughput behavioral tests in 5 dpf larvae to quantify sensorimotor and reflexive locomotor changes in response to a sudden transition of light. This test was conducted using a 96-well plate, including 2 paradigms: (1) a light transition from 1 min of darkness to 1 min of constant light (1000 lx), and (2) a strobe light response involving a transition from 1 min of darkness to 1 min of strobing light at 10 Hz.
5. Assessment of thigmotaxis


6. Locomotor assessment
7. Startle response test
NOTE: This test measures the visual startle response (VSR), also known as dark-flash induced startle, elicited by sudden transitions to darkness. This startle response test assesses a photic-evoked visual startle induced by abrupt, millisecond-scale dark flashes. Unlike the dark-strobe light paradigm, which involves repeated light pulses to evaluate sustained behavioral responses, this assay focuses on rapid, reflexive motor reactions to an acute visual stimulus.
8. Light-dark challenge assay
9. Disposal of MPTP waste
NOTE: After each behavioral experiment, spray and wipe MPTP-contacted surfaces (e.g., lab benches and the ZebraBox) with freshly prepared sodium hypochlorite (bleach; ≥10% v/v).
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Sleep-wake regulation monitoring
The 52-h sleep-wake regulation monitoring began at 4 dpf and was conducted using a 96-well plate. Zebrafish in MPTP-treated showed significant disruptions in sleep structure compared to the WT group. Representative sleep curves, wake activity plots, and averaged activity traces are shown in Figure 2. Parameters of sleep-wake regulation analysis in zebrafish larvae are shown in Figure 3. Total sleep time was s...
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This study developed and verified a comprehensive protocol to evaluate and analyze MPTP-induced PD-like behavioral phenotype. This protocol integrated 6 different tests, locomotor assessment, thigmotaxis assay, startle response test, photomotor response paradigms (including strobe light stimulation), light-dark challenge assay, and sleep-wake regulation monitoring, to evaluate and depict the motor and non-motor defects of PD. The results indicated that compared with the WT group, MPTP-treated zebrafish larvae showed moto...
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The authors declare no conflicts of interest.
This work was supported by grants from the National Natural Science Foundation of China (No. 21906095), Shandong University Young Scholar Future Program Sponsorship, the Shandong Natural Science Foundation (No. ZR2019BB018), the Fundamental Research Funds of Shandong University (No. 2017GN0030), the China Postdoctoral Science Foundation (No. 2018M640640). It is also supported by both the 2025 Open Research Fund from the Digital Fujian Institute of Big Data for Elderly Rehabilitation and Nursing (Grant No. BDRI202502) and the 2025 Open Research Fund from the Key Laboratory of Bioactive Materials, Ministry of Education, Nankai University (Grant No. SWHX-202503). Research Project of Jinan Microecological Biomedicine Shandong Laboratory (Grant No.JNL-2023002KF). The authors would like to thank the Laboratory Animal Center, Qilu Hospital of Shandong University, and Dr. Sun Chengxi from the Department of Clinical Laboratory, Qilu Hospital of Shandong University, for their assistance during the experiment.
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| Name | Company | Catalog Number | Comments |
|---|---|---|---|
| 100× E3 stock solution | Shanghai Feixi Biotechnology | N/A | containing 34.8 g NaCl, 1.6 g KCl, 5.8 g CaCl2·2H2O, and 9.78 g MgCl2·6H2O per liter |
| 12-Well Cell Culture Plate | NEST Biotechnology | 712011 | Non-Treated, Non-Pyrogenic, Sterile, Polystyrene.Used for zebrafish larval behavioral assays |
| 24-Well Cell Culture Plate | NEST Biotechnology | 702011 | Non-Treated, Non-Pyrogenic, Sterile, Polystyrene.Used for zebrafish larval behavioral assays |
| 3 mL Pasteur Pipette | Biologix | 30-0238A1 | |
| 6-Well Cell Culture Plate | NEST Biotechnology | 703011 | Non-Treated, Non-Pyrogenic, Sterile, Polystyrene.Used for zebrafish larval behavioral assays |
| 96-Well Cell Culture Plate | NEST Biotechnology | 701011 | Non-Treated, Non-Pyrogenic, Sterile, Polystyrene.Used for zebrafish larval behavioral assays |
| MATLAB R2020a | MathWorks, USA | N/A | MATLAB R2020a, Campus-wide license obtained from Shandong University software portal (softms.sdu.edu.cn).Used for statistical analysis of zebrafish larval behavioral data. |
| Microsoft Excel | Microsoft | N/A | Microsoft Excel (part of Microsoft Office), version installed via Shandong University licensed software portal (softms.sdu.edu.cn). |
| MPTP(1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine) | Beyotime | 41125281 | 5 mg |
| Petri Dish | NEST Biotechnology | 704202 | 100 mm, sterile, easy grip handle, TC-Treated |
| Sodium hypochlorite solution | Macklin | S817439 | stock household bleach solution(6-14% active chlorine basis), diluted to ≥10% v/v for surface and waste decontamination; also diluted 1:5 (6% bleach: water) for euthanasia of MPTP-treated zebrafish larvae. |
| Stereo Microscope | Olympus | SZX2 series | |
| Zebrabox High-Resolution Video Tracking System | Viewpoint, France | N/A | |
| Zebralab Software | Viewpoint, France | N/A | Version (3,52,3,87) |
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