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Methods for Imaging and Analyzing Neural Activity in the Retina
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Suva Roy

Suva Roy

University of Utah

Dr. Suva Roy is a faculty member of the University of Utah. He was a Senior Research Associate in the Department of Neurobiology at Duke University School of Medicine. He has worked in the field of visual neuroscience for more than ten years. He started his neuroscience career studying the fly visual system with Dr. Rob de Ruyter at Indiana University. In his postdoc at Duke in the lab of Dr. Greg Field, he transitioned to studying visual processing in the mammalian retina. He has led and contributed to several studies, including those that delineate the role of cell-surface proteins in the developing retina, the organization of receptive fields of retinal ganglion cell types and its consequences for natural scene encoding, and the development of a custom light-sheet imaging system for ex vivo retinal studies. His research interests also span other areas in vision science, including, emerging techniques for large-scale imaging of retinal activity and comparative neurobiology of vision.

Collection Overview

Retinal research has benefited tremendously from the convergence of genetic tools and imaging techniques. Cell types can be genetically targeted to express engineered fluorescent proteins. Specialized microscopes and imaging tools can be used to monitor changes in the fluorescence of these proteins. These techniques have allowed for the precise tracking of neural activity at various spatiotemporal scales, as well as the assessment of how visual signals are processed within the subcellular compartments of a single neuron and neuronal ensembles. The advent of these techniques has also brought new challenges. Sophisticated imaging techniques, such as two-photon imaging, light sheet imaging, and adaptive optics laser scanning ophthalmoscopy, often require custom-designed experimental platforms that can provide high-quality measurements of neural activity while maintaining an optimal environment for the biological tissue. Because the retina is naturally light sensitive, it places additional constraints on the amount, wavelength, and type of excitation light delivered. There has also been a concerted effort to improve the algorithms for accurately extracting fluorescence dynamics that report neural activity from data corrupted by background noise and illumination, particularly across large neural ensembles. This Methods Collection aims to provide a platform for the retinal research community to share experimental protocols, designs, imaging techniques, and quantitative analysis tools for studying neural activity in the retina at the level of single neurons to neural populations across rodents and nonhuman primates.

Articles

Calcium Imaging In Electrically Stimulated Flat-Mounted Retinas

Calcium Imaging In Electrically Stimulated Flat-Mounted Retinas

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2023

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