Antigen Binding

Antigen binding is the specific, reversible interaction between an antigen and an antibody, B-cell receptor, or other immune recognition molecule, enabling the immune system to identify molecular targets. Binding occurs when a complementary epitope on the antigen fits a paratope or receptor site, with hydrogen bonds, electrostatic forces, hydrophobic interactions, and van der Waals forces collectively determining affinity and specificity. These interactions help initiate immune signaling, support antigen presentation, and allow laboratory methods such as ELISA, flow cytometry, and immunoprecipitation to detect or isolate target molecules. Studying antigen binding clarifies host-pathogen recognition and immune regulation while guiding antibody design, vaccine evaluation, and diagnostic development.

Antigen Binding - Related Videos

Research

JoVE Journal - Biochemistry
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Determination of High-affinity Antibody-antigen Binding Kinetics Using Four Biosensor Platforms

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Cited by 30 •

2017

We describe here protocols for the measurement of antibody-antigen binding affinity and kinetics using four commonly used biosensor platforms.

Research

JoVE Journal - Medicine

Determining Binding Affinity (KD) of Radiolabeled Antibodies to Immobilized Antigens

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2022

Here, a method is described to determine the binding affinity (KD) of radiolabeled antibodies to immobilized antigens. KD is the equilibrium dissociation constant that can be determined from a saturation binding experiment by measuring the total, specific, and nonspecific binding of a radiolabeled antibody at various concentrations to its antigen.

Viral Antigen Microarray Assay to Detect Antibody Isotypes in Serum Against Viral Antigen

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2025

In this video, we demonstrate the process for detecting antibody isotypes in multiple human serum samples using a microarray slide printed with antigenic subtypes of influenza virus strains.

Development of an Antigen-driven Colitis Model to Study Presentation of Antigens by Antigen Presenting Cells to T Cells

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Cited by 9 •

2016

In this antigen-driven colitis model, OT-II CD4+ T cells expressing a red fluorescent protein were adoptively transferred into RAG-/- mice that express a green fluorescent protein in mononuclear phagocytes (MPs). The hosts were challenged with Escherichia coli (E.coli) expressing the ovalbumin protein (OVA) fused to a cyan fluorescent protein (CFP).

Education

JoVE Core - Molecular Biology

The Equilibrium Binding Constant and Binding Strength

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2020

The equilibrium binding constant (Kb) quantifies the strength of a protein-ligand interaction. Kb can be calculated as follows when the reaction is at equilibrium: where P and L are the unbound protein and ligand, respectively, and PL is the protein-ligand complex. As the amount of bound ligand is also related to the rate of ligand binding, experiments can also determine Kb by examining the rates of protein-ligand association (kon) and dissociation (koff) using the following ratio: Thus,...

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