Automated Tracking

Automated tracking is a computational method that detects and follows moving objects across sequential images or video, reducing the need for manual observation in biological research. It typically identifies targets through image segmentation or object detection, then links their positions between frames using features such as shape, appearance, and predicted movement to reconstruct trajectories. In biology, automated tracking can quantify cell migration, organismal behavior, tissue dynamics, and interactions among multiple individuals. These measurements provide objective data on speed, direction, persistence, and spatial patterns, supporting reproducible analysis of processes that are difficult to capture through manual tracking alone.

Automated Tracking - Related Videos

Research

JoVE Journal - Biology
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Using an Automated 3D-tracking System to Record Individual and Shoals of Adult Zebrafish

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Cited by 38 •

2013

The use of a 3D automatic video system that can track individual and groups of zebrafish is described. As application example we explore the effects of the NMDA-receptor antagonist MK-801 on shoals of zebrafish.

Research

JoVE Journal - Behavior
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Fully Automated Leg Tracking in Freely Moving Insects using Feature Learning Leg Segmentation and Tracking (FLLIT)

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Cited by 6 •

2020

We describe detailed protocols for using FLLIT, a fully automated machine learning method for leg claw movement tracking in freely moving Drosophila melanogaster and other insects. These protocols can be used to quantitatively measure subtle walking gait movements in wild type flies, mutant flies and fly models of neurodegeneration.

Research

JoVE Journal - Neuroscience

PyOKR: A Semi-Automated Method for Quantifying Optokinetic Reflex Tracking Ability

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Cited by 1 •

2024

We describe here PyOKR, a semi-automated quantitative analysis method that directly measures eye movements resulting from visual responses to two-dimensional image motion. A Python-based user interface and analysis algorithm allows for higher throughput and more accurate quantitative measurements of eye-tracking parameters than previous methods.

An Automated Method for Assessing Visual Acuity in Infants and Toddlers Using an Eye-Tracking System

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Cited by 2 •

2023

In this paper, we present a novel automated method for assessing visual acuity in infants and toddlers by using an eye-tracking system.

Automated Acoustic Dispensing for the Serial Dilution of Peptide Agonists in Potency Determination Assays

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Cited by 1 •

2016

Peptide adsorption to plasticware during traditional tip-based serial dilutions can significantly impact potency determination and confound the understanding of structure-activity relationships used for lead identification and lead optimization phases of drug discovery. Here methods for automated acoustic non-contact serial dilution of peptide samples are described.

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