Collagenase Enzymatic Digestion

Collagenase enzymatic digestion is a tissue-processing method that uses collagenase enzymes to break down collagen, a major structural protein in the extracellular matrix, and release cells for laboratory analysis. Collagenase cleaves peptide bonds within collagen fibers, typically under controlled conditions that balance effective matrix disruption with preservation of cell viability and surface markers. In cancer research, this approach helps dissociate tumors and surrounding tissues into single-cell suspensions for flow cytometry, culture, molecular profiling, and functional assays. By improving access to tumor, stromal, and immune cell populations, collagenase digestion supports investigation of tumor heterogeneity, cell interactions, and responses to treatment.

Collagenase Enzymatic Digestion - Related Videos

Research

JoVE EoE - Pancreatic Cancer

Pancreatic Islets Isolation through Collagenase Perfusion: An Enzymatic Method to Isolate Pancreatic Islet Cells

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2023

Pancreatic islets, also called the Islets of Langerhans, are a cluster of endocrine cells which produces hormones for glucose regulation and other important biological functions. This protocol explains a method for isolating pancreatic islets by first perfusing collagenase via Ampulla of Vater to digest the exocrine pancreatic tissue and a simplified density gradient centrifugation to purify the islets from mice.

Isolation of Infiltrating Leukocytes from Mouse Skin Using Enzymatic Digest and Gradient Separation

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Cited by 33 •

2016

This protocol describes enzymatic digestion of mouse skin in nutrient-rich medium followed by gradient separation to isolate leukocytes. Cells thus derived can be used for diverse downstream applications. This is an effective, economical, and improved alternative to tissue dissociation machines and harsher trypsin and dispase-based tissue digestion protocols.

Tumor Enzymatic Digestion: A Procedure to Generate Tumor Cell Suspension from Patient-derived Xenograft Cancer Mouse Models

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2023

This video describes the procedure to obtain tumor cell suspension from patient-derived xenograft or PDX cancer mouse models. Small animal models provide an expeditious, reproducible, and adaptable platform to study tumor progression and different metastatic...

Chromatin Shearing: A Method to Generate Chromatin Fragments Using Enzymatic Digestion

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2023

This video describes the protocol for chromatin shearing using micrococcal nuclease enzymatic digestion. Chromatin shearing is an essential step in Chromatin immunoprecipitation or ChIp workflow, which helps investigate protein-DNA interaction in human chronic myeloid leukemia cells. In the feature protocol chromatin shearing is performed using sonication.

Detrusor Smooth Muscle Cell Isolation: An Enzymatic Digestion Procedure to Obtain DSM Cells from Human Urinary Bladder Specimens

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2023

In this video, we demonstrate the isolation of detrusor smooth muscle cells from human urinary bladder specimens using a two-step sequential enzymatic treatment.

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