Fluorescent Protein Knock-in

Fluorescent protein knock-in is a genome-engineering strategy that inserts a fluorescent protein gene into a chosen genomic locus, allowing researchers to visualize a protein’s native expression or location in living cells. In a typical approach, CRISPR-Cas9 creates a targeted DNA break, and a donor template carrying the fluorescent sequence guides repair through homology-directed repair or related precise editing mechanisms. In neuroscience, these tags can label neurons, trace axons and dendrites, and monitor protein trafficking or distribution with microscopy. Because the tag remains linked to the endogenous gene, knock-in measurements can more closely reflect native regulation than overexpressed reporters, supporting studies of neural circuits, development, and disease mechanisms.

Fluorescent Protein Knock-in - Related Videos

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JoVE Journal - Biology
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Green Fluorescent Protein-based Expression Screening of Membrane Proteins in Escherichia coli

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Cited by 34 •

2015

A streamlined approach to screening for the expression of recombinant membrane proteins in Escherichia coli based on fusion to green fluorescent protein is presented.

Research

JoVE Journal - Neuroscience

Spectral Confocal Imaging of Fluorescently tagged Nicotinic Receptors in Knock-in Mice with Chronic Nicotine Administration

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Cited by 12 •

2012

We have developed a novel technique of quantifying nicotinic acetylcholine receptor changes within subcellular regions of specific subtypes of CNS neurons to better understand the mechanisms of nicotine addiction by using a combination of approaches including fluorescent protein tagging of the receptor using the knock-in approach and spectral confocal imaging.

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JoVE Journal - Biochemistry
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Rapid Assessment of Membrane Protein Quality by Fluorescent Size Exclusion Chromatography

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Cited by 2 •

2023

The present protocol describes a procedure to perform fluorescent size exclusion chromatography (FSEC) on membrane proteins to assess their quality for downstream functional and structural analysis. Representative FSEC results collected for several G-protein coupled receptors (GPCRs) under detergent-solubilized and detergent-free conditions are presented.

Generation of Maternal Mutants Using zpc:cas9 Knock-in Zebrafish

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2025

Here, we describe a protocol for generating maternal mutant that couples a stable zpc:cas9 knock-in line with Tol2-mediated delivery of sgRNA expression cassettes.

Fluorescence Anisotropy-Based Detection of Protein-Protein Interactions

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2025

In this video, we describe the fluorescence anisotropy technique to study the interactions between the fluorophore-tagged Shwachman-diamond syndrome (SBDS) protein and the elongation factor-like 1 GTPase (EFL1). On incubating SBDS proteins with gradually increasing concentrations of EFL1, a steady increase in anisotropy is observed, indicating a successful interaction between the two proteins.

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