Synaptosome Isolation

Synaptosome isolation is a biochemical technique used to separate sealed, nerve terminal-derived particles from brain tissue for studying synaptic structure and function. The process typically involves gentle homogenization to release synaptic endings, followed by differential centrifugation and, when greater purity is required, density-gradient centrifugation to enrich synaptosomes based on size and density. These isolated preparations retain components such as synaptic vesicles, membrane proteins, receptors, and mitochondria, allowing researchers to examine neurotransmitter release, uptake, metabolism, and signaling under controlled conditions. In neuroscience, synaptosome isolation supports investigations of synaptic physiology, neurodegenerative disease, drug responses, and molecular changes associated with neuronal injury.

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JoVE EoE - Neuropathology

Live-cell Phagocytosis Assay of Microglia-Like Cells Using Human Synaptosomes

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2025

Source: Funes, S., et. al., Human Microglia-like Cells: Differentiation from Induced Pluripotent Stem Cells and In Vitro Live-cell Phagocytosis Assay using Human Synaptosomes. J. Vis. Exp. (2022)This video demonstrates an assay to study the phagocytic capacity of microglia-like cells using pH-sensitive fluorescent dye-labeled synaptosomes.

Measuring Dopamine Uptake in Mouse Brain Synaptosomes Using Radiolabeled Dopamine

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2025

This video demonstrates the assessment of dopamine uptake in synaptosomes harvested from mouse brains. It outlines steps for preparing synaptosomes for dopamine uptake via dopamine transporters, treating them with varying concentrations of radiolabeled dopamine, isolating the synaptosomes, and measuring radioactivity to quantify dopamine uptake.

In Vitro Phagocytosis Assay: A Live Imaging Based Method to Study Real-time Astrocyte Mediated Synaptosome Phagocytosis

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2025

In this video, we evaluate the phagocytic capacity of purified astrocytes in vitro by live imaging assay. The assay serves as an effective screening platform to identify chemical compounds that can enhance or inhibit the phagocytic capacity of astrocytes.

Assessment of Dopaminergic Homeostasis in Mice by Use of High-performance Liquid Chromatography Analysis and Synaptosomal Dopamine Uptake

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Cited by 20 •

2017

Synaptosomal dopamine uptake and high-performance liquid chromatography analysis represent experimental tools to investigate dopamine homeostasis in mice by assessing the function of the dopamine transporter and levels of dopamine in striatal tissue, respectively. Here we present protocols to measure dopamine tissue content and assess the functionality of the dopamine transporter.

A Novel In Vitro Live-imaging Assay of Astrocyte-mediated Phagocytosis Using pH Indicator-conjugated Synaptosomes

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Cited by 20 •

2018

This protocol presents an in vitro live-imaging phagocytosis assay to measure the phagocytic capacity of astrocytes. Purified rat astrocytes and microglia are used along with pH indicator-conjugated synaptosomes. This method can detect real-time engulfment and degradation kinetics and provides a suitable screening platform to identify factors modulating astrocyte phagocytosis.

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