Two-photon Fluorescence

Two-photon fluorescence is an optical imaging phenomenon in which a fluorophore emits light after absorbing two lower-energy photons nearly simultaneously, enabling high-resolution visualization in biological and engineered systems. By using a focused near-infrared laser, the nonlinear absorption process confines excitation to the focal volume, where the combined photon energy reaches the fluorophore’s excitation threshold and produces fluorescence. This intrinsic spatial selectivity supports three-dimensional imaging of cells, tissues, and biomaterials, including measurements deep within scattering samples with less out-of-focus excitation than conventional fluorescence methods. In bioengineering, it helps characterize tissue structure, cellular behavior, and dynamic processes while informing the design and evaluation of engineered tissues and diagnostic platforms.

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JoVE Journal - Biology

Measuring Diffusion Coefficients via Two-photon Fluorescence Recovery After Photobleaching

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Cited by 4 •

2010

In this article we will describe the procedure for measuring diffusion coefficients using multi-photon fluorescence recovery after photobleaching. We will begin by aligning the laser along the optical path to the sample and determining the proper experimental parameters, then continue generating and finally fitting fluorescence recovery curves.

Deep-Tissue Imaging of a Zebrafish Brain Using a Three-Photon Fluorescence Microscope

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2025

Source: Hontani, Y., et al. Deep-Tissue Three-Photon Fluorescence Microscopy in Intact Mouse and Zebrafish Brain. J. Vis. Exp. (2022)This video demonstrates the setup and execution of three-photon imaging in an anesthetized zebrafish brain. The protocol enables deep-tissue visualization of fluorescently labeled neurons, revealing real-time neuronal activity and structures for neuroscience research applications.

Longitudinal Two-Photon Imaging of Fluorescently Labeled Neurons in a Live Mouse Hippocampus

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2025

Source: Ulivi, A. F., et. al. Longitudinal Two-Photon Imaging of Dorsal Hippocampal CA1 in Live Mice. J. Vis. Exp. (2019) This video demonstrates longitudinal two-photon imaging of fluorescently-labeled pyramidal neurons in a live mouse, showcasing the preparation, cannula alignment, and imaging of dendrites and dendritic spines to study neuronal structure in the hippocampal CA1 region.

Visualizing Protein Kinase A Activity in a Mouse Using Two-Photon Fluorescence Lifetime Imaging Microscopy

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2025

Source: Jongbloets, B. C., et al. Visualizing Protein Kinase A Activity In Head-fixed Behaving Mice Using In Vivo Two-photon Fluorescence Lifetime Imaging Microscopy. J. Vis. Exp. (2019) This video demonstrates a two-photon fluorescence lifetime imaging microscopy procedure for visualizing protein kinase A activity in head-fixed, behaving mice during enforced locomotion.

Quantifying Glomerular Permeability of Fluorescent Macromolecules Using 2-Photon Microscopy in Munich Wistar Rats

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Cited by 28 •

2013

A technique utilizing high resolution intavital 2-photon microscopy to directly visualize and quantify gloemrular filtration in surface glomeruli. This method allows for direct determination of permeability characteristics of macromolecules in both normal and diseased states.

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