Oxygen-dependent Degradation

Oxygen-dependent degradation is a regulated process in which protein stability changes according to cellular oxygen availability, allowing cells to adjust gene expression to their environment. In the best-characterized pathway, oxygen- and iron-dependent prolyl hydroxylases modify hypoxia-inducible factor alpha (HIF-α) when oxygen is present; the von Hippel–Lindau protein then recognizes HIF-α, promotes its ubiquitination, and directs it to the proteasome. When oxygen becomes limiting, hydroxylation decreases, HIF-α accumulates, and hypoxia-responsive genes are activated. In cancer research, this mechanism helps explain how tumor cells adapt to hypoxic microenvironments and supports studies of angiogenesis, metabolism, tumor progression, and therapeutic response.

Oxygen-dependent Degradation - Related Videos

Research

JoVE Journal - Neuroscience

Cerebral Blood Oxygenation Measurement Based on Oxygen-dependent Quenching of Phosphorescence

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Cited by 28 •

2011

We present an experimental procedure for measuring the partial pressure of oxygen (pO2) in cerebral vasculature based on oxygen-dependent quenching of phosphorescence. Animal preparation and imaging procedures were outlined for both large field of view CCD-based imaging of pO2 in rats and 2-photon excitation based imaging of pO2 in mice.

Blood Oxygen Level-Dependent Functional Magnetic Resonance Imaging of the Visual Cortex

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2025

Source: Galenchik-Chan, A., et al. Functional Magnetic Resonance Imaging (fMRI) of the Visual Cortex with Wide-View Retinotopic Stimulation. J. Vis. Exp. (2023). The video demonstrates functional magnetic resonance imaging (fMRI) of the visual cortex to map activity based on blood oxygenation levels. Structural MRI images are acquired as anatomical references, followed by fMRI scans. Visual stimuli are displayed to activate retinotopic neurons in the visual cortex. The increased energy demand...

Education

JoVE Core - Molecular Biology

Proteins: From Genes to Degradation

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2020

Within a biological system, the DNA encodes the RNA, and the nucleotide sequence in the RNA further defines the amino acid sequence in the protein. This is referred to as “The Central Dogma of Molecular Biology” - a term coined by Francis Crick. Central dogma is a firm principle in biology that defines the flow of genetic information within any life form. The two fundamental steps in central dogma are - transcription and translation. Transcription is the synthesis of RNA molecules by RNA...

Regulated Protein Degradation

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2020

It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells. Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...

Detecting Reactive Oxygen Species

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2023

Reactive oxygen species are chemically active, oxygen-derived molecules capable of oxidizing other molecules. Because of their reactive nature, there are many deleterious effects associated with unchecked ROS production, including structural damage to DNA and other biological molecules. However, ROS can also be mediators of physiological signaling. There is accumulating evidence that ROS play significant roles in everything from activation of transcription factors to the mediation of...

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