Saleh Alseekh

Publications

• Towards Development, Maintenance, and Standardized Phenotypic Characterization of Single-Seed-Descent Genetic Resources for Lupins
  Current Protocols. Jul, 2021  |   Pubmed ID: 34242495
• Mass Spectrometry-based Metabolomics: a Guide for Annotation, Quantification and Best Reporting Practices
  Nature Methods. Jul, 2021  |   Pubmed ID: 34239102
• Plasticity of Rosette Size in Response to Nitrogen Availability is Controlled by an RCC1-family Protein
  Plant, Cell & Environment. Jul, 2021  |   Pubmed ID: 34228823
• Genome-wide Association Studies: Assessing Trait Characteristics in Model and Crop Plants
  Cellular and Molecular Life Sciences : CMLS. Jul, 2021  |   Pubmed ID: 34196733
• Tyr-Asp Inhibition of Glyceraldehyde 3-phosphate Dehydrogenase Affects Plant Redox Metabolism
  The EMBO Journal. 06, 2021  |   Pubmed ID: 34156108
• Towards the Development, Maintenance, and Standardized Phenotypic Characterization of Single-Seed-Descent Genetic Resources for Common Bean
  Current Protocols. May, 2021  |   Pubmed ID: 34004060
• Multi-omics Analysis of Early Leaf Development in
  Patterns (New York, N.Y.). Apr, 2021  |   Pubmed ID: 33982025
• Ultra-high-performance Liquid Chromatography High-resolution Mass Spectrometry Variants for Metabolomics Research
  Nature Methods. Jul, 2021  |   Pubmed ID: 33972782
• Evolutionary Gain of Oligosaccharide Hydrolysis and Sugar Transport Enhanced Carbohydrate Partitioning in Sweet Watermelon Fruits
  The Plant Cell. Jul, 2021  |   Pubmed ID: 33570606
• Phytochromes Control Metabolic Flux, and Their Action at the Seedling Stage Determines Adult Plant Biomass
  Journal of Experimental Botany. 04, 2021  |   Pubmed ID: 33544130
• The Genetics Underlying Metabolic Signatures in a Brown Rice Diversity Panel and Their Vital Role in Human Nutrition
  The Plant Journal : for Cell and Molecular Biology. Apr, 2021  |   Pubmed ID: 33529453
• Using Metabolomics to Assist Plant Breeding
  Methods in Molecular Biology (Clifton, N.J.). 2021  |   Pubmed ID: 33263901
• Pod Indehiscence in Common Bean is Associated with the Fine Regulation of PvMYB26
  Journal of Experimental Botany. 02, 2021  |   Pubmed ID: 33247939
• Metabolomic Analysis of Natural Variation in Arabidopsis
  Methods in Molecular Biology (Clifton, N.J.). 2021  |   Pubmed ID: 33175389
• An -Derived Biostimulant Protects Model and Crop Plants from Oxidative Stress
  Metabolites. Dec, 2020  |   Pubmed ID: 33396419
• Publisher Correction: Tomato Multiomics at APEELing Resolution
  Nature Plants. Dec, 2020  |   Pubmed ID: 33262513
• Tomato Multiomics at APEELing Resolution
  Nature Plants. 12, 2020  |   Pubmed ID: 33144685
• Model-assisted Identification of Metabolic Engineering Strategies for Jatropha Curcas Lipid Pathways
  The Plant Journal : for Cell and Molecular Biology. 09, 2020  |   Pubmed ID: 33001507
• Mobile Transposable Elements Shape Plant Genome Diversity
  Trends in Plant Science. 11, 2020  |   Pubmed ID: 32863103
• Dissection of the Domestication-shaped Genetic Architecture of Lettuce Primary Metabolism
  The Plant Journal : for Cell and Molecular Biology. 11, 2020  |   Pubmed ID: 32772408
• Genome Assembly of Wild Tea Tree DASZ Reveals Pedigree and Selection History of Tea Varieties
  Nature Communications. 07, 2020  |   Pubmed ID: 32709943
• MicroTom Metabolic Network: Rewiring Tomato Metabolic Regulatory Network Throughout the Growth Cycle
  Molecular Plant. 08, 2020  |   Pubmed ID: 32561360
• Quantitative Trait Loci Analysis of Seed-specialized Metabolites Reveals Seed-specific Flavonols and Differential Regulation of Glycoalkaloid Content in Tomato
  The Plant Journal : for Cell and Molecular Biology. 09, 2020  |   Pubmed ID: 32538521
• The Penium Margaritaceum Genome: Hallmarks of the Origins of Land Plants
  Cell. 05, 2020  |   Pubmed ID: 32442406
• Molecular Plant Responses to Combined Abiotic Stresses Put a Spotlight on Unknown and Abundant Genes
  Journal of Experimental Botany. 08, 2020  |   Pubmed ID: 32442250
• Conservation and Diversification of Flavonoid Metabolism in the Plant Kingdom
  Current Opinion in Plant Biology. 06, 2020  |   Pubmed ID: 32422532
• Network-based Strategies in Metabolomics Data Analysis and Interpretation: from Molecular Networking to Biological Interpretation
  Expert Review of Proteomics. 04, 2020  |   Pubmed ID: 32380880
• An Improved Extraction Method Enables the Comprehensive Analysis of Lipids, Proteins, Metabolites and Phytohormones from a Single Sample of Leaf Tissue Under Water-deficit Stress
  The Plant Journal : for Cell and Molecular Biology. 08, 2020  |   Pubmed ID: 32378781
• Network Analysis Provides Insight into Tomato Lipid Metabolism
  Metabolites. Apr, 2020  |   Pubmed ID: 32295308
• The Style and Substance of Plant Flavonoid Decoration; Towards Defining Both Structure and Function
  Phytochemistry. Jun, 2020  |   Pubmed ID: 32203741
• Metabolomics in the Context of Plant Natural Products Research: From Sample Preparation to Metabolite Analysis
  Metabolites. Jan, 2020  |   Pubmed ID: 31952212
• Construction and Applications of a B Vitamin Genetic Resource for Investigation of Vitamin-dependent Metabolism in Maize
  The Plant Journal : for Cell and Molecular Biology. 01, 2020  |   Pubmed ID: 31520508
• Plasticity in Metabolism Underpins Local Responses to Nitrogen in Populations
  Plant Direct. Nov, 2019  |   Pubmed ID: 31799492
• MicroRNA-Mediated Metabolic Reprograming in Renal Cancer
  Cancers. Nov, 2019  |   Pubmed ID: 31756931
• Mass Spectrometry-Based Untargeted Plant Metabolomics
  Current Protocols in Plant Biology. 12, 2019  |   Pubmed ID: 31743625
• Posttranslational Modification of the NADP-Malic Enzyme Involved in C Photosynthesis Modulates the Enzymatic Activity During the Day
  The Plant Cell. 10, 2019  |   Pubmed ID: 31363039
• The Structure and Function of Major Plant Metabolite Modifications
  Molecular Plant. 07, 2019  |   Pubmed ID: 31200079
• Large-scale Metabolite Quantitative Trait Locus Analysis Provides New Insights for High-quality Maize Improvement
  The Plant Journal : for Cell and Molecular Biology. 07, 2019  |   Pubmed ID: 30888713
• Identification and Characterization of Metabolite Quantitative Trait Loci in Tomato Leaves and Comparison with Those Reported for Fruits and Seeds
  Metabolomics : Official Journal of the Metabolomic Society. 03, 2019  |   Pubmed ID: 30874962
• Extensive Variations in Diurnal Growth Patterns and Metabolism Among Spp. Strains
  Plant Physiology. 05, 2019  |   Pubmed ID: 30755474
• Branched-Chain Amino Acid Catabolism Impacts Triacylglycerol Homeostasis in
  Plant Physiology. 04, 2019  |   Pubmed ID: 30728273
• In Vivo Detection of Protein Cysteine Sulfenylation in Plastids
  The Plant Journal : for Cell and Molecular Biology. 02, 2019  |   Pubmed ID: 30394608
• A Solanum Neorickii Introgression Population Providing a Powerful Complement to the Extensively Characterized Solanum Pennellii Population
  The Plant Journal : for Cell and Molecular Biology. 01, 2019  |   Pubmed ID: 30230636
• Crop Metabolomics: from Diagnostics to Assisted Breeding
  Metabolomics : Official Journal of the Metabolomic Society. 11, 2018  |   Pubmed ID: 30830402
• A Tomato Tocopherol-Binding Protein Sheds Light on Intracellular α-Tocopherol Metabolism in Plants
  Plant & Cell Physiology. Nov, 2018  |   Pubmed ID: 30239816
• Interorganelle Communication: Peroxisomal MALATE DEHYDROGENASE2 Connects Lipid Catabolism to Photosynthesis Through Redox Coupling in Chlamydomonas
  The Plant Cell. 08, 2018  |   Pubmed ID: 29997239
• Quantitative Trait Loci Analysis Identifies a Prominent Gene Involved in the Production of Fatty Acid-Derived Flavor Volatiles in Tomato
  Molecular Plant. 09, 2018  |   Pubmed ID: 29960108
• Defining the Convergence of Ethylene and Auxin Signaling in Tomato
  The New Phytologist. 07, 2018  |   Pubmed ID: 29927493
• Tecia Solanivora Infestation Increases Tuber Starch Accumulation in Pastusa Suprema Potatoes
  Journal of Integrative Plant Biology. Nov, 2018  |   Pubmed ID: 29888549
• The Integration of Metabolomics and Next-Generation Sequencing Data to Elucidate the Pathways of Natural Product Metabolism in Medicinal Plants
  Planta Medica. Aug, 2018  |   Pubmed ID: 29843183
• Molecular Mechanisms Preventing Senescence in Response to Prolonged Darkness in a Desiccation-Tolerant Plant
  Plant Physiology. 07, 2018  |   Pubmed ID: 29789435
• Guidelines for Sample Normalization to Minimize Batch Variation for Large-Scale Metabolic Profiling of Plant Natural Genetic Variance
  Methods in Molecular Biology (Clifton, N.J.). 2018  |   Pubmed ID: 29761429
• Metabolomics 20 years On: What Have We Learned and What Hurdles Remain?
  The Plant Journal : for Cell and Molecular Biology. 06, 2018  |   Pubmed ID: 29734513
• A Plastidial Pantoate Transporter with a Potential Role in Pantothenate Synthesis
  The Biochemical Journal. 02, 2018  |   Pubmed ID: 29382740
• An Integrated Multi-layered Analysis of the Metabolic Networks of Different Tissues Uncovers Key Genetic Components of Primary Metabolism in Maize
  The Plant Journal : for Cell and Molecular Biology. 03, 2018  |   Pubmed ID: 29381266
• Inheritance Patterns in Metabolism and Growth in Diallel Crosses of Arabidopsis Thaliana from a Single Growth Habitat
  Heredity. 05, 2018  |   Pubmed ID: 29234160
• STOREKEEPER RELATED1/G-Element Binding Protein (STKR1) Interacts with Protein Kinase SnRK1
  Plant Physiology. 02, 2018  |   Pubmed ID: 29192025
• The Genetic Architecture of Photosynthesis and Plant Growth-related Traits in Tomato
  Plant, Cell & Environment. 02, 2018  |   Pubmed ID: 29044606
• Dose-dependent Interactions Between Two Loci Trigger Altered Shoot Growth in BG-5 × Krotzenburg-0 (Kro-0) Hybrids of Arabidopsis Thaliana
  The New Phytologist. Jan, 2018  |   Pubmed ID: 28906562
• Canalization of Tomato Fruit Metabolism
  The Plant Cell. Nov, 2017  |   Pubmed ID: 29093214
• De Novo Assembly of a New Accession Using Nanopore Sequencing
  The Plant Cell. Oct, 2017  |   Pubmed ID: 29025960
• The Genome and Phenome of the Green Alga UTEX 3007 Reveal Adaptive Traits for Desert Acclimatization
  ELife. 06, 2017  |   Pubmed ID: 28623667
• NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato
  Frontiers in Plant Science. 2017  |   Pubmed ID: 28326087
• Starch Synthase 4 and Plastidal Phosphorylase Differentially Affect Starch Granule Number and Morphology
  Plant Physiology. May, 2017  |   Pubmed ID: 28275148
• Identification of a Chromosome 4 Fruit Flavor and Nutritional Quality-Associated Metabolite QTL
  Frontiers in Plant Science. 2016  |   Pubmed ID: 27881988
• Combined Use of Genome-Wide Association Data and Correlation Networks Unravels Key Regulators of Primary Metabolism in Arabidopsis Thaliana
  PLoS Genetics. Oct, 2016  |   Pubmed ID: 27760136
• Multi-level Engineering Facilitates the Production of Phenylpropanoid Compounds in Tomato
  Nature Communications. Oct, 2015  |   Pubmed ID: 26497596
• Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population
  The Plant Cell. Jul, 2015  |   Pubmed ID: 26187921
• Reduction of the Cytosolic Phosphoglucomutase in Arabidopsis Reveals Impact on Plant Growth, Seed and Root Development, and Carbohydrate Partitioning
  PloS One. 2014  |   Pubmed ID: 25401493
• The Genome of the Stress-tolerant Wild Tomato Species Solanum Pennellii
  Nature Genetics. Sep, 2014  |   Pubmed ID: 25064008
• On the Regulation and Function of Secondary Metabolism During Fruit Development and Ripening
  Journal of Experimental Botany. Jan, 2014  |   Pubmed ID: 24446507
• Double Knockout Mutants of Arabidopsis Grown Under Normal Conditions Reveal That the Plastidial Phosphorylase Isozyme Participates in Transitory Starch Metabolism
  Plant Physiology. Feb, 2014  |   Pubmed ID: 24302650
• Resolution by Recombination: Breaking Up Solanum Pennellii Introgressions
  Trends in Plant Science. Oct, 2013  |   Pubmed ID: 24029406