Netrin Knockdown

Netrin knockdown is an experimental method that reduces the expression of netrin genes to investigate how these guidance cues regulate cellular behavior. Researchers typically use RNA interference, short hairpin RNA, or antisense oligonucleotides to decrease netrin mRNA, limiting production of the secreted protein and weakening signaling through receptors such as DCC and UNC5. In biology, this approach helps reveal netrin’s roles in axon guidance, neuronal migration, cell adhesion, and tissue development by comparing knockdown cells or organisms with appropriate controls. It can also clarify how disrupted netrin signaling contributes to neural development and disease-related processes.

Netrin Knockdown - Related Videos

Research

JoVE Journal - Biology

Preparation of Cell-lines for Conditional Knockdown of Gene Expression and Measurement of the Knockdown Effects on E4orf4-Induced Cell Death

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Cited by 3 •

2012

Contribution of the ACF chromatin remodeling factor to E4orf4-induced cell death was measured. The protocol includes selection of cell clones in which doxycycline treatment induces conditional knockdown of the ACF subunits Acf1 and SNF2h, and use of the DAPI assay to measure E4orf4-induced cell death in the inducible cell lines.

A Multiwell Liquid-Based Assay for Screening C. elegans Knockdowns

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2025

Source: Anderson, Q. L. et al. A High-throughput, High-content, Liquid-based C. elegans Pathosystem. J. Vis. Exp. (2018)This video demonstrates a high-throughput screening method using Caenorhabditis elegans to study gene knockdowns during host-pathogen interactions. It outlines the procedure for preparing knockdown worms and transferring them to assay plates to evaluate the effects of pathogen-induced worm killing.

A Simple Alternative to Stereotactic Injection for Brain Specific Knockdown of miRNA

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Cited by 6 •

2015

MicroRNAs play crucial roles in the brain and are potential targets for modeling neuro-degeneration. However, perturbing miRNA levels is challenging due to the short length of miRNA and inaccessibility of the brain tissue. This video presents a method for antagomir design and brain specific delivery using a neuropeptide in mice.

Generating Conditional Knockdown Cells Using a Tetracycline-Responsive Lentiviral shRNA Expression System

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2026

Source: Kubala, M. H. & DeClerck, Y. A. Conditional Knockdown of Gene Expression in Cancer Cell Lines to Study the Recruitment of Monocytes/Macrophages to the Tumor Microenvironment. J. Vis. Exp. (2017)This video demonstrates the generation of conditional knockdown cancer cell lines using a Tet-inducible lentiviral shRNA system. It outlines the steps for viral transduction, antibiotic selection, and doxycycline-induced gene silencing.

Assessing Somatic Hypermutation in Ramos B Cells after Overexpression or Knockdown of Specific Genes

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Cited by 5 •

2011

We describe how to perform retroviral or lentiviral infections of overexpression or shRNA-containing constructs in the human Ramos B-cell line and how to measure somatic hypermutation in these cells.

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