Organoid Fragmentation

Organoid fragmentation is the controlled division of three-dimensional, stem cell-derived tissue models into smaller pieces for maintenance, expansion, or experimental manipulation. The process typically uses mechanical disruption, such as pipetting or cutting, to reduce organoid size while preserving viable cells, tissue architecture, and essential cell-cell or cell-matrix interactions; fragments can then be embedded in a suitable extracellular matrix and cultured under defined conditions. In biology, fragmentation supports organoid passaging, increases culture yield, and helps standardize starting material for disease modeling, drug testing, developmental studies, and tissue engineering. Consistent fragmentation is important for reproducible growth and comparable experimental outcomes.

Organoid Fragmentation - Related Videos

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JoVE Core - Biology

Habitat Fragmentation

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2020

Habitat fragmentation describes the division of a more extensive, continuous habitat into smaller, discontinuous areas. Human activities such as land conversion, as well as slower geological processes leading to changes in the physical environment, are the two leading causes of habitat fragmentation. The fragmentation process typically follows the same steps: perforation, dissection, fragmentation, shrinkage, and attrition. Perforation and dissection often occur during the initial stages of...

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JoVE Journal - Biology
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Electroeluting DNA Fragments

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Cited by 8 •

2010

This procedure allows the purification of DNA fragments with high yield.

Organoids as Model for Infectious Diseases: Culture of Human and Murine Stomach Organoids and Microinjection of Helicobacter Pylori

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Cited by 144 •

2015

Stem cell derived cultures harbor tremendous potential to model infectious diseases. Here, the culture of mouse and human gastric organoids derived from adult stem cells is described. The organoids are microinjected with the gastric pathogen Helicobacter pylori.

In vitro Organoid Culture of Primary Mouse Colon Tumors

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Cited by 44 •

2013

A simple method to establish primary murine colon tumor organoid is described. This method utilizes the feature that colon tumor cells survive and grow into organoids in media containing limited growth factors, whereas normal colon epithelial do not.

Organoid Electroporation: A Method to Transfect Plasmid DNA into Gastrointestinal Organoids

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2023

This video describes the electroporation protocol for transfecting large plasmids into three-dimensional gastrointestinal organoids to prove its universal functionality in different entities, namely pancreatic ductal adenocarcinoma (PDAC), colorectal cancer (CRC), cholangiocarcinoma (CCC), and gastric cancer (GC) organoids.

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