Endogenous Fluorescent Imaging

Endogenous fluorescent imaging is a microscopy approach that visualizes biological structures, activity, or chemistry using fluorescent signals produced within cells or tissues rather than externally added dyes. When illuminated at an appropriate excitation wavelength, endogenous fluorophores absorb energy and emit longer-wavelength light that sensitive microscopes detect to create spatially and temporally resolved images. In neuroscience, these signals can reveal neuronal morphology, network activity, cellular metabolism, and changes associated with injury or disease. Because the method can reduce labeling-related disruption, it supports observations in living preparations and helps connect molecular or metabolic events with neuronal function.

Endogenous Fluorescent Imaging - Related Videos

Research

JoVE Journal - Neuroscience
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Detection of Microregional Hypoxia in Mouse Cerebral Cortex by Two-photon Imaging of Endogenous NADH Fluorescence

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Cited by 11 •

2012

Here we describe a method to directly visualize microregional tissue hypoxia in the mouse cortex in vivo. It is based on concurrent two-photon imaging of nicotinamide adenine dinucleotide (NADH) and the cortical microcirculation. This method is useful for high resolution analysis of tissue oxygen supply.

Research

JoVE Journal - Biology

CRISPR/Cas9-mediated Endogenous Fluorescent Tagging of Germline-specific Genes in Caenorhabditis elegans

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2026

A CRISPR/Cas9 microinjection workflow for endogenous fluorescent tagging in the Caenorhabditis elegans germline to obtain homozygous knock-in lines for in vivo protein localization analysis.

Non-invasive In Vivo Fluorescence Optical Imaging of Inflammatory MMP Activity Using an Activatable Fluorescent Imaging Agent

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Cited by 4 •

2017

This paper explains the application of fluorescent imaging using an activatable optical imaging probe to visualize the in vivo activity of key matrix metalloproteinases in two different experimental models of inflammation.

Rapid Analysis and Exploration of Fluorescence Microscopy Images

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Cited by 3 •

2014

Here we describe a workflow for rapidly analyzing and exploring collections of fluorescence microscopy images using PhenoRipper, a recently developed image-analysis platform.

Imaging of Fluorescently-Labeled Motor Neurons in an Adult Drosophila Leg

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2025

Source: Guan, W., et. al. Visualize Drosophila Leg Motor Neuron Axons Through the Adult Cuticle. J. Vis. Exp. (2018) This video demonstrates imaging of Drosophila legs with green fluorescent protein-expressing motor neurons using confocal microscopy. A laser and two detectors capture GFP and cuticle autofluorescence. Images are processed by splitting channels, subtracting autofluorescence, and merging into a colored composite image to visualize axons within the leg segment.

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