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Journal / Immunology and Infection / Analisi del trascrittoma ad alto rendimento per…
JoVE Journal
Immunology and Infection
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Analisi del trascrittoma ad alto rendimento per indagare le interazioni ospite-patogeno
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Analisi del trascrittoma ad alto rendimento per indagare le interazioni ospite-patogeno

Article DOI: 10.3791/62324-v • 14:58 min • March 5th, 2022
March 5th, 2022 •
1,2, 3, 2,3, 3, 2,3, 2,3,4
1Laboratory of Pathology of Infectious Diseases, Department of Pathology, Medical School, University of São Paulo, 2Scientific Platform Pasteur USP, 3Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, 4Hospital Israelita Albert Einstein

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Il protocollo qui presentato descrive una pipeline completa per analizzare i dati del trascrittoma di sequenziamento dell'RNA dalle letture grezze all'analisi funzionale, compresi i passaggi di controllo della qualità e pre-elaborazione per approcci analitici statistici avanzati.

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Immunologia e infezione Numero 181 sequenziamento ad alto rendimento RNA-seq interazione ospite-patogeno geni differenzialmente espressi geni co-espressi analisi funzionale grado molecolare di perturbazione dei campioni
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