Lda Deprotonation

LDA deprotonation is a chemical method that uses lithium diisopropylamide, a strong, sterically hindered, non-nucleophilic base, to remove an acidic proton from an organic molecule. In a common application, LDA reacts with a ketone at low temperature in an aprotic solvent such as tetrahydrofuran, generating a lithium enolate while minimizing unwanted nucleophilic addition; temperature, solvent, and reagent order influence whether the kinetic enolate forms. Chemists use this controlled deprotonation to prepare enolates for subsequent reactions with electrophiles, enabling carbon–carbon bond formation and selective functionalization in organic synthesis.

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JoVE Journal - Chemistry

Isolation and Chemical Characterization of Lipid A from Gram-negative Bacteria

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Cited by 66 •

2013

Isolation and characterization of the lipid A domain of lipopolysaccharide (LPS) from gram-negative bacteria provides insight into cell surface based mechanisms of antibiotic resistance, bacterial survival and fitness, and how chemically diverse lipid A molecular species differentially modulate host innate immune responses.

Determination of the Gas-phase Acidities of Oligopeptides

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Cited by 3 •

2013

The determination of the gas-phase acidities of cysteine-containing oligopeptides is described. The experiments are performed using a triple quadrupole mass spectrometer. The relative acidities of the peptides are measured using collision-induced dissociation experiments, and the quantitative acidities are determined using the extended Cooks kinetic method.

An Assay for Real-Time Monitoring of Extracellular pH in Dental Biofilms

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2025

This video demonstrates a real-time assay for monitoring extracellular pH in dental biofilms using a pH-sensitive ratiometric probe. When an in situ-grown bacterial biofilm is exposed to glucose, a reduction in extracellular pH near the bacterial biomass protonates the probe, leading to its increased concentration inside the bacteria. The disparity in emission wavelength between the protonated and unprotonated probe is utilized to calculate the pH across the extracellular matrix of the biofilm...

Synthesis and Purification of Iodoaziridines Involving Quantitative Selection of the Optimal Stationary Phase for Chromatography

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Cited by 3 •

2014

A protocol for the diastereoselective one-pot preparation of cis-N-Ts-iodoaziridines is described. The generation of diiodomethyllithium, addition to N-Ts aldimines and cyclization of the amino gem-diiodide intermediate to iodoaziridines is demonstrated. Also included is a protocol to rapidly and quantitatively assess the most appropriate stationary phase for purification by chromatography.

Investigating the Human Gut Microbial Activity on Exopolysaccharides

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2026

Source: Hu, Y. et.al., Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems. J. Vis. Exp. (2019)This video demonstrates the analysis of short-chain fatty acid production by human gut microbiota in response to exopolysaccharides. This highlights microbial fermentation products separation and quantification using gas chromatography. The results reveal that exopolysaccharides modulate microbial metabolites that influence host-pathogen...

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