T1 Mapping Sequence

T1 mapping sequence is a quantitative magnetic resonance imaging (MRI) method that measures the longitudinal relaxation time, or T1, of tissue on a pixel-by-pixel basis rather than relying only on image contrast. It acquires images with varied preparation conditions, such as different inversion or saturation recovery times, then fits the resulting signal changes to a relaxation model to generate a parametric T1 map. In medicine, T1 mapping supports objective tissue characterization in organs including the heart, brain, and liver, helping researchers assess edema, fibrosis, inflammation, or altered tissue composition and monitor disease or treatment-related changes.

T1 Mapping Sequence - Related Videos

Research

JoVE Journal - Biology

Amplification, Next-generation Sequencing, and Genomic DNA Mapping of Retroviral Integration Sites

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Cited by 56 •

2016

We describe a protocol for amplifying retroviral integration sites from the genomic DNA of infected cells, sequencing the amplified virus-host junctions, and then mapping these sequences to a reference genome. We also describe techniques to quantify the distribution of integration sites relative to various genomic annotations using BEDTools.

Research

JoVE Journal - Biology
Free Sample

Chromatin Interaction Analysis with Paired-End Tag Sequencing (ChIA-PET) for Mapping Chromatin Interactions and Understanding Transcription Regulation

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Cited by 17 •

2012

Chromatin Interaction Analysis by Paired-End Tag Sequencing (ChIA-PET) is a method for de novo detection of chromatin interactions, for better understanding of transcriptional control.

DamID-seq: Genome-wide Mapping of Protein-DNA Interactions by High Throughput Sequencing of Adenine-methylated DNA Fragments

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Cited by 21 •

2016

We describe herein an assay by coupling DNA adenine methyltransferase identification (DamID) to high throughput sequencing (DamID-seq). This improved method provides a higher resolution and a wider dynamic range, and allows analyzing DamID-seq data in conjunction with other high throughput sequencing data such as ChIP-seq, RNA-seq, etc.

Education

JoVE Science Education - Psychology

Motor Maps

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2023

Source: Laboratories of Jonas T. Kaplan and Sarah I. Gimbel—University of Southern California One principle of brain organization is the topographic mapping of information. Especially in sensory and motor cortices, adjacent regions of the brain tend to represent information from adjacent parts of the body, resulting in maps of the body expressed on the surface of the brain. The primary sensory and motor maps in the brain surround a prominent sulcus known as the central sulcus. The cortex...

Fate Mapping

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2023

Fate mapping is a technique used to understand how embryonic cells divide, differentiate, and migrate during development. In classic fate mapping experiments, cells in different areas of an embryo are labeled with a chemical dye and then tracked to determine which tissues or structures they form. Technological improvements now allow for individual cells to be marked and traced throughout embryonic development and adulthood. This video reviews the concepts behind fate mapping, and then details a...

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